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rifcsphigho2_02_scaffold_3970

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3970_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..124
DNA (123bp) protein (41aa)
hypothetical protein Tax=AR11
rifcsphigho2_02_scaffold_3970_2
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

124..4458
DNA (4335bp) protein (1445aa)
Subtilisin-like serine protease Tax=GWA2_OD1_31_28_partial
peptidase S8/S53 subtilisin kexin sedolisin id=5044239 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alkaline protease
rifcsphigho2_02_scaffold_3970_3
unknown

Not on your lists

4455..4874
DNA (420bp) protein (140aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4864..6168
DNA (1305bp) protein (435aa)
Subtilisin Tax=AR11
peptidase S8/S53 subtilisin kexin sedolisin id=5044239 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3970_5
unknown

Not on your lists

6161..6484
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_6
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

6481..7839
DNA (1359bp) protein (453aa)
Subtilisin-like serine protease Tax=GWA2_OD1_31_28_partial
peptidase S8/S53 subtilisin kexin sedolisin id=5044239 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3970_7
unknown

Not on your lists

7836..8345
DNA (510bp) protein (170aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_8

Not on your lists

8420..11005
DNA (2586bp) protein (862aa)
Metallophosphoesterase id=5044242 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Metallophosphoesterase {ECO:0000313|EMBL:KHO46523.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_3970_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11269..12012
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JME5_9BACT rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
rifcsphigho2_02_scaffold_3970_10

Not on your lists


comp(12289..12597)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10P
rifcsphigho2_02_scaffold_3970_11

Not on your lists

comp(12670..13953)
DNA (1284bp) protein (428aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043959 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
rifcsphigho2_02_scaffold_3970_12

Not on your lists

comp(14097..16271)
DNA (2175bp) protein (725aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5043960 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 2
rifcsphigho2_02_scaffold_3970_13
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(16272..16778)
DNA (507bp) protein (169aa)
nucleoside diphosphate kinase ; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000375701A
nucleoside diphosphate kinase
rifcsphigho2_02_scaffold_3970_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16780..16962)
DNA (183bp) protein (61aa)
50S ribosomal protein L24e Tax=AR11
50S ribosomal protein L24e id=5800775 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L24E
rifcsphigho2_02_scaffold_3970_15

Not on your lists


comp(16962..17255)
DNA (294bp) protein (98aa)
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
30S ribosomal protein S28e
rifcsphigho2_02_scaffold_3970_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(17266..17604)
DNA (339bp) protein (113aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=AR4
rpl7ae; 50S ribosomal protein L7
rifcsphigho2_02_scaffold_3970_17
unknown

Not on your lists

17811..19208
DNA (1398bp) protein (466aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_18

Not on your lists

comp(19332..20045)
DNA (714bp) protein (238aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:AIF00786.1}; EC=2.5.1.89 {ECO:0000313|EMBL:AIF00786.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="unculture
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
uppS; hypothetical protein
rifcsphigho2_02_scaffold_3970_19

Not on your lists

20119..21021
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsphigho2_02_scaffold_3970_20
unknown

Not on your lists

comp(21022..21291)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_21
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

21363..21944
DNA (582bp) protein (194aa)
Tax=BJP_IG2069_Methanobacteriales_33_27
rifcsphigho2_02_scaffold_3970_22
unknown

Not on your lists

comp(22001..22687)
DNA (687bp) protein (229aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(22834..23373)
DNA (540bp) protein (180aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_3970_24
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(23370..24179)
DNA (810bp) protein (270aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_3970_25
unknown

Not on your lists

comp(24172..25599)
DNA (1428bp) protein (476aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_26
unknown

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25911..27380
DNA (1470bp) protein (490aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_27
unknown

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comp(27381..27989)
DNA (609bp) protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

28097..28882
DNA (786bp) protein (262aa)
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA-binding protein snRNP-like protein Tax=AR4
fibronectin-binding protein
rifcsphigho2_02_scaffold_3970_29
unknown

Not on your lists

28952..29665
DNA (714bp) protein (238aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3970_30

Not on your lists

29705..30514
DNA (810bp) protein (270aa)
Marine sediment metagenome DNA, contig: S01H1_S00061 {ECO:0000313|EMBL:GAF97319.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying items 1-30 of 52 in total

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