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rifcsphigho2_02_scaffold_1534_25

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_44_15

near complete RP 37 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38 MC: 1
Location: 23302..23742

Top 3 Functional Annotations

Value Algorithm Source
Nonsense-mediated mRNA decay protein 3 {ECO:0000313|EMBL:KHO51433.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 140.0
  • Bit_score: 111
  • Evalue 1.00e-21
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 131.0
  • Bit_score: 87
  • Evalue 1.50e-14
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 126.0
  • Bit_score: 72
  • Evalue 1.40e-10

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Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 441
ATGGAGCACAATGACCAGTATTTTGAGGGAATCCTTCAGCTAAGGAACCCTACAAAGGAGATAATGCGGTTTGTCTACTCAGTGCAGGAAAAGGGAGGCATAAGGCTTGTTTCAAAGGAAAAAAAAGTGCCAAACGGATATGACCTTTATTTCATGTCCAACAAAAAACTGCTGAATGTCGGAAAGATGCTCAAGGAGAGTTTTCCCGGCAGGCTTGAGGTAAGCTCAAGGCTCTTTTCCAGGAACAGGCAGACTAGTAGGGAAGTATACAGGATGAGCGTGCTTTTCAGGCATTTCAGCATAAAGAAAGGAGACAATATAAATTTCAAGGGAGACAGCATGAAAATACTCTCTCTCGGGGAAAAGATACTCGTTCAGGATATCTATACCGGAAAAAAATACAGCATAAGGTATTCAGACTTCGAGAGGTATTCAAGATAG
PROTEIN sequence
Length: 147
MEHNDQYFEGILQLRNPTKEIMRFVYSVQEKGGIRLVSKEKKVPNGYDLYFMSNKKLLNVGKMLKESFPGRLEVSSRLFSRNRQTSREVYRMSVLFRHFSIKKGDNINFKGDSMKILSLGEKILVQDIYTGKKYSIRYSDFERYSR*