ggKbase home page

rifcsphigho2_02_scaffold_11960_7

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_44_15

near complete RP 37 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38 MC: 1
Location: 3185..3580

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 128.0
  • Bit_score: 198
  • Evalue 4.50e-48
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 131.0
  • Bit_score: 183
  • Evalue 1.40e-43
Translation initiation factor 5A similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 151
  • Evalue 1.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 396
ATGGCAGATACAAAAATGGCTAGTGTTGGCGGATTGCAGAAAGGCAGCTATGTCGTTCTGGAAGATGCAGCATGCAAAGTCGTTGATATCCAGGTTTCAAGGCCGGGAAAGCACGGCCACGCCAAAGTAAGGCTTACCGCAGTCGGCCTGGTTGACAGTAAGAAGAGAGTTGCAGTTATGCCGGGCCATGACAATGTTCCTGTCCCTATAGTTGAGAAGAAAACAGCGCAGGTGCTTTCAATTGCAGGAAACACTGCAAATGTAATGGACTCTGAAAGCTATGAGACCTTTGACTTGGAAATCCCCGAAGAGCTTAAGGGCCAGGTAACAGAAGGCGCTTCAGTGCTTTACTGGGAGATCCTGAATGACCGGGTCATGAAACAGATTAAAGGCTAA
PROTEIN sequence
Length: 132
MADTKMASVGGLQKGSYVVLEDAACKVVDIQVSRPGKHGHAKVRLTAVGLVDSKKRVAVMPGHDNVPVPIVEKKTAQVLSIAGNTANVMDSESYETFDLEIPEELKGQVTEGASVLYWEILNDRVMKQIKG*