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rifcsphigho2_02_scaffold_4250

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4250_1
unknown

Not on your lists

comp(104..223)
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4250_2
unknown

Not on your lists

comp(220..411)
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4250_3
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

480..1256
DNA (777bp) protein (259aa)
Uncharacterized protein MJECS01 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y3401_METJA
hypothetical protein
Uncharacterized protein MJECS01; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain
rifcsphigho2_02_scaffold_4250_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1253..2611)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B63470
adenine-specific DNA methylase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_4250_5
unknown

Not on your lists

comp(2690..2968)
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4250_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3015..3224)
DNA (210bp) protein (70aa)
Tax=AR4
rifcsphigho2_02_scaffold_4250_7
unknown

Not on your lists

comp(3226..3450)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4250_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3573..5051
DNA (1479bp) protein (493aa)
Transposase IS4 family protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RH57_ARCPA
transposase IS4 family protein
Transposase family protein {ECO:0000313|EMBL:KCZ72682.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.
rifcsphigho2_02_scaffold_4250_9
unknown

Not on your lists

comp(5054..5230)
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4250_10
unknown

Not on your lists

comp(5359..6660)
DNA (1302bp) protein (434aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY Tax=AR20
Phosphoesterase, RecJ-like protein
rifcsphigho2_02_scaffold_4250_11
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(6660..7109)
DNA (450bp) protein (150aa)
30S ribosomal protein S15/S13e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO id=5103093 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S15/S13e Tax=AR17
30S ribosomal protein S15/S13e
rifcsphigho2_02_scaffold_4250_trna_1
unknown

Not on your lists

comp(7160..7249)
DNA (90bp)
transferRNA
rifcsphigho2_02_scaffold_4250_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7286..7534)
DNA (249bp) protein (83aa)
id=5050713 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_13
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7550..8008)
DNA (459bp) protein (153aa)
id=5050712 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Tax=AR18
rifcsphigho2_02_scaffold_4250_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8033..8665)
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=5050711 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Putative uncharacterized protein Tax=AR18
rifcsphigho2_02_scaffold_4250_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8903..9301)
DNA (399bp) protein (133aa)
id=5050710 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_16
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9305..9739)
DNA (435bp) protein (145aa)
id=5050709 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9745..10359)
DNA (615bp) protein (205aa)
Serine/threonine protein kinase, RIO1 family; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] id=5050708 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Serine/threonine protein kinase, RIO1 family; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=AR18
Serine/threonine protein kinase, RIO1 family (EC:2.7.1.-)
rifcsphigho2_02_scaffold_4250_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

10410..10736
DNA (327bp) protein (109aa)
id=5050707 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(10733..12094)
DNA (1362bp) protein (454aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=AR18
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_4250_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12147..12686
DNA (540bp) protein (180aa)
id=5050705 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Tax=AR18
rifcsphigho2_02_scaffold_4250_21
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12741..13007
DNA (267bp) protein (89aa)
id=5050704 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13111..14193)
DNA (1083bp) protein (361aa)
radical SAM domain-containing protein; K07129 id=5050703 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
radical SAM domain-containing protein; K07129 Tax=AR18
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_4250_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14277..14510)
DNA (234bp) protein (78aa)
id=5050702 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

14589..15302
DNA (714bp) protein (238aa)
hypothetical protein id=5050701 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
hypothetical protein Tax=AR18
conserved membrane protein of unknown function
rifcsphigho2_02_scaffold_4250_25

Not on your lists

comp(15299..16615)
DNA (1317bp) protein (439aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO53369.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Signal recognition particle GTPase
rifcsphigho2_02_scaffold_4250_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16655..18688)
DNA (2034bp) protein (678aa)
id=5050699 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Tax=AR18
rifcsphigho2_02_scaffold_4250_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18724..19149)
DNA (426bp) protein (142aa)
id=5050698 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_4250_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19212..20192)
DNA (981bp) protein (327aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR18
tRNA pseudouridine synthase D TruD
Displaying 29 items

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