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rifcsphigho2_02_scaffold_2632

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2632_1

Not on your lists

2..283
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos28G7 RepID=Q64AW8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83459.1}; TaxID=285381 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos28G7.;"
hypothetical protein
rifcsphigho2_02_scaffold_2632_2
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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341..1072
DNA (732bp) protein (244aa)
hypothetical protein id=17472726 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein; K07133 Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
rifcsphigho2_02_scaffold_2632_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1120..1398)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B76BFF
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:CCX76124.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea s
GIY-YIG domain-containing protein
rifcsphigho2_02_scaffold_2632_4

Not on your lists

1454..2221
DNA (768bp) protein (256aa)
daunorubicin resistance ATP-binding protein; K09687 antibiotic transport system ATP-binding protein id=5050156 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:KHO45089.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
multidrug ABC transporter ATPase
rifcsphigho2_02_scaffold_2632_5

Not on your lists

2211..2984
DNA (774bp) protein (258aa)
ABC-2 type transporter {ECO:0000313|EMBL:KHO45090.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ABC-2 type transporter id=5050157 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ABC-2 type transporter
rifcsphigho2_02_scaffold_2632_6
unknown

Not on your lists

comp(3002..3814)
DNA (813bp) protein (271aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_7
unknown

Not on your lists

3874..4236
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_8
CG_Micra_05, Micraarchaeota, Archaea

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4758..5708
DNA (951bp) protein (317aa)
l-threonine 3-dehydrogenase (EC:1.1.1.103) Tax=CG_Micra_05
dka:DKAM_0817 NAD-dependent epimerase/dehydratase id=99096 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
NAD-dependent epimerase/dehydratase
rifcsphigho2_02_scaffold_2632_9

Not on your lists

5719..6903
DNA (1185bp) protein (395aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme id=5800455 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
7-keto-8-aminopelargonate synthetase-like protein enzyme {ECO:0000313|EMBL:AJF61786.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2632_10

Not on your lists


6993..8762
DNA (1770bp) protein (590aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5240716 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1579370 species="Archaea.;" sourc
rifcsphigho2_02_scaffold_2632_11
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

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8764..9333
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AK47_9BACT
adenylyl cyclase, CyaB-type Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
rifcsphigho2_02_scaffold_2632_12
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

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9457..10293
DNA (837bp) protein (279aa)
Prophage antirepressor {ECO:0000313|EMBL:KKP36196.1}; TaxID=1618475 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_32_13.;"
Prophage antirepressor id=4223600 bin=GWC2_Ignavibacteria_38_9 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
prophage antirepressor
rifcsphigho2_02_scaffold_2632_13
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

10368..11264
DNA (897bp) protein (299aa)
bifunctional methionine sulfoxide reductase B/A protein; K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] id=5099115 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version rbh
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:KKR05780.1}; TaxID=1619100 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
bifunctional methionine sulfoxide reductase B/A protein
rifcsphigho2_02_scaffold_2632_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11342..11749
DNA (408bp) protein (136aa)
hypothetical protein
seg id=5241124 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
seg Tax=AR10
rifcsphigho2_02_scaffold_2632_15
unknown

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11799..12044
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_16
unknown

Not on your lists

12087..12368
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12369..12800)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Caldicellulosiruptor RepID=B9MK64_CALBD
hypothetical protein; K08978 putative membrane protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_2632_18

Not on your lists


comp(12804..14516)
DNA (1713bp) protein (571aa)
hypothetical protein; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=5240721 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1579370 species="Archaea.;" so
hypothetical protein
rifcsphigho2_02_scaffold_2632_19
unknown

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comp(14582..14941)
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(15452..15670)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003804B2F
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
rifcsphigho2_02_scaffold_2632_21
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(15667..15942)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000371D1F1
Uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
rifcsphigho2_02_scaffold_2632_trna_3
unknown

Not on your lists

comp(16066..16140)
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_2632_22
unknown

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comp(16202..16381)
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_23
unknown

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16525..16737
DNA (213bp) protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2632_24
Eimeria acervulina, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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16781..17479
DNA (699bp) protein (233aa)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria acervulina RepID=U6GCV4_EIMAC
Uncharacterized protein {ECO:0000313|EMBL:CDI76419.1}; Flags: Fragment;; TaxID=5801 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.
42.t00003; hypothetical protein
rifcsphigho2_02_scaffold_2632_25
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(17494..17985)
DNA (492bp) protein (164aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5I9_METB6
flavodoxin/nitric oxide synthase Tax=CG_Elusi_05
ArsR family transcriptional regulator
rifcsphigho2_02_scaffold_2632_26
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(18002..18907)
DNA (906bp) protein (302aa)
acetoin utilization protein n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B6DF40
histone deacetylase superfamily protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
acuC; acetoin utilization protein AcuC
rifcsphigho2_02_scaffold_2632_27
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18969..19703
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6S0_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ08303.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
rifcsphigho2_02_scaffold_2632_28
BJP_IG2103_Methanoregula_55_19, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19700..21073)
DNA (1374bp) protein (458aa)
id=1845951 bin=GWD2_Clostridiales_32_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
Tax=BJP_IG2103_Methanoregula_55_19
rifcsphigho2_02_scaffold_2632_trna_1
unknown

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21274..21522
DNA (249bp)
transferRNA
Displaying items 1-30 of 39 in total

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