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rifcsphigho2_02_scaffold_1148

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1148_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

3..713
DNA (711bp) protein (237aa)
mechanosensitive ion channel protein MscS Tax=CG_Woesearch_01
MscS mechanosensitive ion channel
MscS mechanosensitive ion channel id=5241659 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1148_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

775..2052
DNA (1278bp) protein (426aa)
dihydroorotase (EC:3.5.2.3)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] id=5241016 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] Tax=AR10
rifcsphigho2_02_scaffold_1148_3

Not on your lists

2062..2682
DNA (621bp) protein (207aa)
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase (EC:4.1.1.23 2.4.2.10); K13421 uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23] id=5241017 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
rifcsphigho2_02_scaffold_1148_4
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2689..3036)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2Y0_FERPA
Putative uncharacterized protein Tax=AR13
hypothetical protein
rifcsphigho2_02_scaffold_1148_5
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(3033..3320)
DNA (288bp) protein (96aa)
hypothetical protein Tax=CG_Micra_05
Putative nucleotidyltransferase id=4157146 bin=GWC2_Deltaproteobacteria_42_51 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
DNA polymerase beta domain-containing protein region
rifcsphigho2_02_scaffold_1148_6
unknown

Not on your lists

3388..3828
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3975..4676
DNA (702bp) protein (234aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5241018 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=AR10
rifcsphigho2_02_scaffold_1148_8

Not on your lists

comp(4689..5663)
DNA (975bp) protein (325aa)
pyrD; dihydroorotate dehydrogenase 1A (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6LAX7_SAPGL
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
rifcsphigho2_02_scaffold_1148_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5721..7247
DNA (1527bp) protein (509aa)
thymidine phosphorylase (EC:2.4.2.4)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5241021 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=AR10
rifcsphigho2_02_scaffold_1148_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(7262..8089)
DNA (828bp) protein (276aa)
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5241023 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=AR10
rifcsphigho2_02_scaffold_1148_11
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

8159..8650
DNA (492bp) protein (164aa)
MutT family protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RBG_19FT_COMBO_OP11_43_10_curated
ADP-ribose pyrophosphatase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGK8_9EURY
ADP-ribose pyrophosphatase
rifcsphigho2_02_scaffold_1148_12
unknown

Not on your lists

comp(8617..9681)
DNA (1065bp) protein (355aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(9736..10632)
DNA (897bp) protein (299aa)
heat shock protein HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_13_Woesearchaeota_36_6_curated
heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog id=2708949 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rifcsphigho2_02_scaffold_1148_14
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(10719..11306)
DNA (588bp) protein (196aa)
LemA family protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RF48_METFO
hypothetical protein Tax=CG_Micra_05
LemA family protein
rifcsphigho2_02_scaffold_1148_15

Not on your lists

comp(11429..12055)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55806.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
hypothetical protein; K07572 putative nucleotide binding protein id=5241024 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1148_16

Not on your lists

comp(12081..12410)
DNA (330bp) protein (110aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO55807.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55807.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=5241025 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
rifcsphigho2_02_scaffold_1148_17

Not on your lists


comp(12407..12733)
DNA (327bp) protein (109aa)
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L21e
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5241026 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1148_18

Not on your lists

12982..13563
DNA (582bp) protein (194aa)
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
transcription initiation factor TFIID TATA-box-binding protein
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5241036 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1148_19
unknown

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13621..14745
DNA (1125bp) protein (375aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_20
unknown

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14989..15426
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_21
unknown

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15423..16775
DNA (1353bp) protein (451aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_22
unknown

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16788..17801
DNA (1014bp) protein (338aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_23
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

17857..18858
DNA (1002bp) protein (334aa)
Bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWH6_TEPAE
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKU99677.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
rifcsphigho2_02_scaffold_1148_24
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(18855..19499)
DNA (645bp) protein (215aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RBG_13_OP3X_46_9_curated
N-glycosylase/DNA lyase id=4129347 bin=GWF2_OP3_38_59 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
N-glycosylase/DNA lyase
rifcsphigho2_02_scaffold_1148_25
unknown

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comp(19510..19782)
DNA (273bp) protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1148_26
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19859..21949
DNA (2091bp) protein (697aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS69434.1}; TaxID=1618425 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
Oligosaccharyl transferase, STT3 subunit
Oligosaccharyl transferase, STT3 subunit id=5241042 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1148_27
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

21986..23020
DNA (1035bp) protein (345aa)
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC:2.7.8.15)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] id=5241043 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] Tax=AR10
rifcsphigho2_02_scaffold_1148_28
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

23082..23528
DNA (447bp) protein (149aa)
cpsF; polysaccharide biosynthesis protein CpsF
cpsF; polysaccharide biosynthesis protein CpsF id=5241044 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cpsF; polysaccharide biosynthesis protein CpsF Tax=AR10
rifcsphigho2_02_scaffold_1148_29

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23528..24010
DNA (483bp) protein (161aa)
EpsH protein
EpsH protein id=5241045 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
EpsH protein {ECO:0000313|EMBL:AJF60036.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1148_30
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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24007..25377
DNA (1371bp) protein (457aa)
Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
Displaying items 1-30 of 44 in total

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