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rifcsphigho2_02_scaffold_6470

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6470_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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138..746
DNA (609bp) protein (203aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15e
rifcsphigho2_02_scaffold_6470_2
unknown

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820..1008
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1056..1904)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KAQ1_9FIRM
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsphigho2_02_scaffold_6470_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2324..2746
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YDT8_PYRNV
Uncharacterized protein Tax=AR11
NUDIX hydrolase
rifcsphigho2_02_scaffold_6470_5
unknown

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2850..2957
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_6
unknown

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2954..3238
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_7

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comp(3239..3628)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2M6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD43521.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FAD synthetase
rifcsphigho2_02_scaffold_6470_8
CG_Woesearch_01, Woesearchaeota, Archaea

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3740..4264
DNA (525bp) protein (175aa)
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=CG_Woesearch_01
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L10e
rifcsphigho2_02_scaffold_6470_9
unknown

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4565..4966
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_10

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4959..5498
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C0FA7
Uncharacterized protein {ECO:0000313|EMBL:KKR47216.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
rifcsphigho2_02_scaffold_6470_11
RBG_16_Archaea_50_20_curated, Archaea

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5677..5928
DNA (252bp) protein (84aa)
putative transcription regulator AbrB/SpoV
Tax=RBG_16_Archaea_50_20_curated
rifcsphigho2_02_scaffold_6470_12
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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5906..6253
DNA (348bp) protein (116aa)
Growth inhibitor n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EAS8_THECK
transcriptional modulator of MazE/toxin MazF Tax=RBG_16_Micrarchaeota_49_10_curated
MazF family transcriptional regulator
rifcsphigho2_02_scaffold_6470_13
unknown

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6255..6407
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_14
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(6470..6844)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DN97_9BACT
vitamin K epoxide reductase Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Vitamin K epoxide reductase
rifcsphigho2_02_scaffold_6470_15
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6883..8049)
DNA (1167bp) protein (389aa)
ytsJ; NAD-dependent malic enzyme (EC:1.1.1.38)
Malic enzyme n=1 Tax=Brevibacillus sp. BC25 RepID=J2GQR1_9BACL
Malic enzyme {ECO:0000313|EMBL:EJL25123.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
rifcsphigho2_02_scaffold_6470_16

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comp(8009..8542)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003716170
Marine sediment metagenome DNA, contig: S03H2_C00951 {ECO:0000313|EMBL:GAH27123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_02_scaffold_6470_17
CG_Woesearch_02, Woesearchaeota, Archaea

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8818..11175
DNA (2358bp) protein (786aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
rifcsphigho2_02_scaffold_6470_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11475..13223
DNA (1749bp) protein (583aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Caldanaerobacter subterraneus RepID=CLPX_THETN
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Th
rifcsphigho2_02_scaffold_6470_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

13708..13971
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CA56B
SpoVT/AbrB family transcription regulator Tax=CG_Woesearch_03
SpoVT/AbrB family transcription regulator
rifcsphigho2_02_scaffold_6470_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

13961..14380
DNA (420bp) protein (140aa)
Nucleotide binding protein PINc Tax=CG_Woesearch_03
Nucleotide binding protein PINc id=3792805 bin=GWF2_Lentisphaerae_57_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
rifcsphigho2_02_scaffold_6470_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14531..14932)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
hypothetical protein Tax=AR4
putative toxin-antitoxin system toxin component, PIN family
rifcsphigho2_02_scaffold_6470_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14929..15186)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family Tax=AR11
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator, AbrB family
rifcsphigho2_02_scaffold_6470_23
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

15417..16970
DNA (1554bp) protein (518aa)
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
FolC bifunctional protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEI6_KOSOT
FolC bifunctional protein
rifcsphigho2_02_scaffold_6470_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(16967..17665)
DNA (699bp) protein (233aa)
hypothetical protein
transmembrane_regions id=5240712 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transmembrane_regions Tax=AR10
rifcsphigho2_02_scaffold_6470_25
unknown

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comp(17640..17858)
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_26
unknown

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17893..18216
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6470_27
AR6, Pacearchaeaota, DPANN, Archaea

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comp(18199..19542)
DNA (1344bp) protein (448aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4) Tax=AR6
type II restriction enzyme and modification methylase (EC:3.1.21.4)
Type II restriction enzyme and modification methylase n=1 Tax=Anabaena sp. 90 RepID=K7W2Y0_9NOST
Displaying 27 items

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