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rifcsphigho2_02_scaffold_10008

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10008_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1..849)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
transposase IS4 family protein Tax=CG_Woesearch_02
transposase IS4 family protein
rifcsphigho2_02_scaffold_10008_2

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940..1644
DNA (705bp) protein (235aa)
30S ribosomal protein S3Ae n=1 Tax=Halogranum salarium B-1 RepID=J3JGM1_9EURY
Ribosomal protein S3Ae (RP-S3Ae, RPS3A) {ECO:0000313|EMBL:AIF00811.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_
30S ribosomal protein S3Ae
rifcsphigho2_02_scaffold_10008_3

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1734..3557
DNA (1824bp) protein (608aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46420.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
id=5045807 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_10008_4
CG_Woesearch_01, Woesearchaeota, Archaea

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3595..5025
DNA (1431bp) protein (477aa)
type II/IV secretion system ATPase; K07332 archaeal flagellar protein FlaI Tax=CG_Woesearch_01
type II/IV secretion system ATPase; K07332 archaeal flagellar protein FlaI id=5045808 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Secretory protein kinase
rifcsphigho2_02_scaffold_10008_5
CG_Woesearch_01, Woesearchaeota, Archaea

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5033..5863
DNA (831bp) protein (277aa)
gspF1; type II secretion system protein F GspF1 Tax=CG_Woesearch_01
gspF1; type II secretion system protein F GspF1; K07333 archaeal flagellar protein FlaJ id=5045809 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type II secretion system protein
rifcsphigho2_02_scaffold_10008_6
CG_Woesearch_01, Woesearchaeota, Archaea

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5863..6903
DNA (1041bp) protein (347aa)
gspF2; type II secretion system protein F GspF2 Tax=CG_Woesearch_01
gspF2; type II secretion system protein F GspF2 id=5045810 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type II secretion system protein F GspF2
rifcsphigho2_02_scaffold_10008_7
CG_Woesearch_01, Woesearchaeota, Archaea

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6978..7202
DNA (225bp) protein (75aa)
Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_10008_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7189..7533)
DNA (345bp) protein (115aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-tRNA hydrolase
peptidyl-tRNA hydrolase Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_10008_9

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8056..8373
DNA (318bp) protein (106aa)
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5044188 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA/RNA-binding protein Alba
rifcsphigho2_02_scaffold_10008_10
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(8381..8959)
DNA (579bp) protein (193aa)
seg Tax=CG_Woesearch_01
seg id=5799838 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_10008_11
unknown

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comp(9187..9804)
DNA (618bp) protein (206aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10008_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(9842..10447)
DNA (606bp) protein (202aa)
transmembrane_regions Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_10008_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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10580..12019
DNA (1440bp) protein (480aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_16_Micrarchaeota_36_9_curated
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
rifcsphigho2_02_scaffold_10008_14
unknown

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12432..12914
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying 14 items

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