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rifcsphigho2_02_scaffold_10120

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10120_1
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1..1233)
DNA (1233bp) protein (411aa)
DNA primase Tax=CG_Woesearch_01
DNA primase id=5041910 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_10120_2
GWA2_OD1_44_12, Parcubacteria, Bacteria

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1990..3312
DNA (1323bp) protein (441aa)
Glutamate-cysteine ligase family 2 Tax=GWA2_OD1_44_12
Uncharacterized protein id=5049175 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_10120_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3309..4661)
DNA (1353bp) protein (451aa)
Putative dihydrolipoamide dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP2_NITGG
dihydrolipoamide dehydrogenase
Putative dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AFU59587.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
rifcsphigho2_02_scaffold_10120_4

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comp(5093..6676)
DNA (1584bp) protein (528aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
helicase (EC:3.6.4.-)
rifcsphigho2_02_scaffold_10120_5

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comp(6975..7130)
DNA (156bp) protein (52aa)
hypothetical protein id=5048091 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45136.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_10120_6
unknown

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7614..8132
DNA (519bp) protein (173aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10120_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8150..8692
DNA (543bp) protein (181aa)
thioredoxin-like protein id=14424609 bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
thioredoxin-like protein Tax=CSP1_2_Dadabacteria
thiol-disulfide isomerase or thioredoxin
rifcsphigho2_02_scaffold_10120_8
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8724..9413
DNA (690bp) protein (230aa)
Universal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3S3_METSW
universal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein
Universal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein {ECO:0000313|EMBL:AEG18067.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales
rifcsphigho2_02_scaffold_10120_9
CG_Woesearch_01, Woesearchaeota, Archaea

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9516..11489
DNA (1974bp) protein (658aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA14_METCZ
DNA gyrase subunit B Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_10120_10
CG_Pacearch_02, Pacearchaeota, Archaea

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11482..11793
DNA (312bp) protein (104aa)
integrase catalytic region Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_10120_11
unknown

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comp(11790..12272)
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying 11 items

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