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rifcsphigho2_02_scaffold_3904

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3904_1
CG_Pacearch_03, Pacearchaeota, Archaea

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1..225
DNA (225bp) protein (75aa)
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_3904_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

206..595
DNA (390bp) protein (130aa)
PIN domain-containing protein Tax=CG_Pacearch_03
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN protein
rifcsphigho2_02_scaffold_3904_3
unknown

Not on your lists

comp(631..1503)
DNA (873bp) protein (291aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_4
unknown

Not on your lists

comp(1591..1776)
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2296..3006)
DNA (711bp) protein (237aa)
3-isopropylmalate dehydratase; K06869 uncharacterized protein Tax=CG_Woesearch_01
hypothetical protein; K06869 uncharacterized protein id=5041645 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_3904_6
unknown

Not on your lists

comp(3092..3763)
DNA (672bp) protein (224aa)
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR id=5102941 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR Tax=AR20
Conserved TM helix repeat-containing protein
rifcsphigho2_02_scaffold_3904_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3876..5759)
DNA (1884bp) protein (628aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] Tax=CG_Woesearch_01
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5047490 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent protease Lon
rifcsphigho2_02_scaffold_3904_8

Not on your lists


comp(5808..7517)
DNA (1710bp) protein (570aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1579373 species="Archaea.;" so
Arginine--tRNA ligase id=5800697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_3904_9
unknown

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7747..8148
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_10
unknown

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8126..9286
DNA (1161bp) protein (387aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_11
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(9287..9850)
DNA (564bp) protein (188aa)
Protein NEQ441 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Y441_NANEQ
ammecr1 domain protein; K09141 hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_3904_12

Not on your lists

comp(10009..10287)
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
rifcsphigho2_02_scaffold_3904_13
unknown

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10367..10489
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10484..11086)
DNA (603bp) protein (201aa)
methyltransferase-like protein Tax=CG_Woesearch_02
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase
rifcsphigho2_02_scaffold_3904_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11134..11742
DNA (609bp) protein (203aa)
Helix-turn-helix, type 11 Tax=CG_Woesearch_02
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3904_16
unknown

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comp(11743..11922)
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_17
unknown

Not on your lists

11999..12193
DNA (195bp) protein (65aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3904_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(12190..13503)
DNA (1314bp) protein (438aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF40_METIK
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=CG_Woesearch_02
translation initiation factor 2 subunit gamma
rifcsphigho2_02_scaffold_3904_19

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comp(13556..14521)
DNA (966bp) protein (322aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3423622 bin=GWA1_ZB2_49_26 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:KKW09255.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsphigho2_02_scaffold_3904_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(14531..14965)
DNA (435bp) protein (145aa)
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=CG_Woesearch_02
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S6e
rifcsphigho2_02_scaffold_3904_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(14998..15606)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6A62
peptidase M50 Tax=RBG_13_Woesearchaeota_36_6_curated
Conserved hypothetical membrane protein, peptidase family M50
rifcsphigho2_02_scaffold_3904_22
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15756..16658)
DNA (903bp) protein (301aa)
bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase (EC:3.1.3.11); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=35513 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ08334.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
rifcsphigho2_02_scaffold_3904_trna_1
unknown

Not on your lists

16748..16835
DNA (88bp)
transferRNA
rifcsphigho2_02_scaffold_3904_23
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16929..17741)
DNA (813bp) protein (271aa)
Putative membrane protein id=3415170 bin=GWA1_Deltaproteobacteria_52_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein Tax=GWA1_Bdellovibrionales_52_35_curated
hypothetical protein
rifcsphigho2_02_scaffold_3904_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

18069..18521
DNA (453bp) protein (151aa)
hypothetical protein
hypothetical protein; K09005 hypothetical protein id=5240732 bin=GW2011_AR10_complete species=Rhodanobacter fulvus genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K09005 hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_3904_trna_2
unknown

Not on your lists

18671..18768
DNA (98bp)
transferRNA
rifcsphigho2_02_scaffold_3904_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19095..19634)
DNA (540bp) protein (180aa)
hypothetical protein
id=5041691 Tax=CG_Woesearch_02
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3904_26
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(19641..20270)
DNA (630bp) protein (210aa)
seg Tax=CG_Woesearch_01
seg id=5800527 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3904_27
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

20433..21215
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
transposase IS4 family protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
transposase IS4 family protein
Displaying 29 items

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