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rifcsphigho2_02_scaffold_24374

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_24374_1
unknown

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398..667
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_24374_2
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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680..1060
DNA (381bp) protein (127aa)
PilT protein domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SU07_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIE04091.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC3
twitching motility protein PilT
rifcsphigho2_02_scaffold_24374_3

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1189..2295
DNA (1107bp) protein (369aa)
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:KHO50485.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044062 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
peptide chain release factor 1
rifcsphigho2_02_scaffold_24374_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2279..2959
DNA (681bp) protein (227aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5045855 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_24374_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3251..5113)
DNA (1863bp) protein (621aa)
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=CG_Woesearch_01
GTP pyrophosphokinase id=5800564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
GTP pyrophosphokinase
rifcsphigho2_02_scaffold_24374_6
CG_Woesearch_01, Woesearchaeota, Archaea

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5383..6312
DNA (930bp) protein (310aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=CG_Woesearch_01
Transcription initiation factor IIB id=5799701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_24374_7
unknown

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comp(6302..6604)
DNA (303bp) protein (101aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 Tax=AR20
cysteine methyltransferase
rifcsphigho2_02_scaffold_24374_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6601..7863)
DNA (1263bp) protein (421aa)
hypothetical protein Tax=CG_Woesearch_02
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_24374_9

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7948..8640
DNA (693bp) protein (231aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5049223 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45214.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_02_scaffold_24374_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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8637..9824
DNA (1188bp) protein (396aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
rplP0; 50S ribosomal protein L10
rifcsphigho2_02_scaffold_24374_11

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9906..10220
DNA (315bp) protein (105aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5049221 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribosomal protein L12P Rpl12p
Displaying 11 items

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