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rifcsphigho2_02_scaffold_2044

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2044_1
CG_Woesearch_03, Woesearchaeota, Archaea

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2..250
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHD1_9EURY
hypothetical protein
hypothetical protein Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_2044_2

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297..905
DNA (609bp) protein (203aa)
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein containing YHS protein {ECO:0000313|EMBL:AJF60943.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_2044_3
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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902..1735
DNA (834bp) protein (278aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHE93718.1}; EC=4.1.1.23 {ECO:0000313|EMBL:KHE93718.1};; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales;
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5041874 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
rifcsphigho2_02_scaffold_2044_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1732..2433)
DNA (702bp) protein (234aa)
Phosphoribosyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8B7_HALXS
PRPP-binding protein, adenine/guanine phosphoribosyltransferase Tax=CG_Woesearch_01
phosphoribosyltransferase
rifcsphigho2_02_scaffold_2044_5
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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2543..3934
DNA (1392bp) protein (464aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=4 Tax=Bacteria RepID=C8WIQ8_EGGLE
adenylosuccinate synthetase
rifcsphigho2_02_scaffold_2044_6
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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3931..4557
DNA (627bp) protein (209aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] T
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W22_NITEU
rifcsphigho2_02_scaffold_2044_7
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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4607..5845
DNA (1239bp) protein (413aa)
AICARFT/IMPCHase bienzyme formylation region n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B3E7A6 rbh
IMP cyclohydrolase
IMP cyclohydrolase {ECO:0000313|EMBL:AIH04158.1}; TaxID=289377 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermode
rifcsphigho2_02_scaffold_2044_8
R_OP11_Woesebacteria_39_10, Woesebacteria, Microgenomates, Bacteria

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5899..6951
DNA (1053bp) protein (351aa)
Membrane protein, putative n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWU8_METCG
membrane protein Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10_curated
membrane protein
rifcsphigho2_02_scaffold_2044_9
unknown

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6902..7051
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2044_10

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7300..7560
DNA (261bp) protein (87aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPD3_EMTOG id=5103558 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein {ECO:0000313|EMBL:KHO53717.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsphigho2_02_scaffold_2044_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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7719..8348
DNA (630bp) protein (210aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein LkmesMB_13139 id=3103614 bin=GWC2_Nitrospirae_57_13 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
rifcsphigho2_02_scaffold_2044_12
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8434..8754)
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
rifcsphigho2_02_scaffold_2044_13
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

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comp(8733..9026)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
rifcsphigho2_02_scaffold_2044_14
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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9488..10933
DNA (1446bp) protein (482aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=GWA1_Bdellovibrionales_52_35_curated
Amidophosphoribosyltransferase id=3259895 bin=GWA1_Deltaproteobacteria_52_35 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
purF; amidophosphoribosyltransferase
rifcsphigho2_02_scaffold_2044_15

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10980..11666
DNA (687bp) protein (229aa)
GMP synthase n=1 Tax=uncultured archaeon GZfos23H7 RepID=Q5XQC1_9ARCH
GMP synthase {ECO:0000313|EMBL:AAU43645.1}; TaxID=285360 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos23H7.;"
glutamine amidotransferase class-I
rifcsphigho2_02_scaffold_2044_16
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

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11663..12973
DNA (1311bp) protein (437aa)
purD; phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase / phosphoribosylamine--glycine ligase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase / Phosphoribosylamine--glycine ligase n=1 Tax=Francisella sp. (strain TX077308) RepID=F8G9D7_FRAST
rifcsphigho2_02_scaffold_2044_17
unknown

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12966..13223
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2044_18
CG_Woesearch_01, Woesearchaeota, Archaea

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13220..14488
DNA (1269bp) protein (423aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVK5_ACEAZ
CoA-binding protein Tax=CG_Woesearch_01
5-formyltetrahydrofolate cyclo-ligase
rifcsphigho2_02_scaffold_2044_19
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

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14485..15822
DNA (1338bp) protein (446aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_48_16_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2823248 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
rifcsphigho2_02_scaffold_2044_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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15819..16661
DNA (843bp) protein (281aa)
folD; bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=14425518 bin=bin1_lowGC species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
folD; bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
rifcsphigho2_02_scaffold_2044_21
GWF2_OD1_38_8, Parcubacteria, Bacteria

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16658..17686
DNA (1029bp) protein (343aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0M9_DESTD
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:KKQ87120.1}; TaxID=1618961 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
rifcsphigho2_02_scaffold_2044_22
CG_Omnitr_04, Omnitrophica, Bacteria

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17634..20495
DNA (2862bp) protein (954aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Omnitr_04
Phosphoribosylformylglycinamidine synthase 2 id=2849890 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
phosphoribosylformylglycinamidine synthase
rifcsphigho2_02_scaffold_2044_23
CG_Elusi_03, Elusimicrobia, Bacteria

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20489..21205
DNA (717bp) protein (239aa)
PurL; phosphoribosylformylglycinamidine synthase domain-containing protein; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Elusi_03
phosphoribosylformylglycinamidine synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3A265
phosphoribosylformylglycinamidine synthase I
rifcsphigho2_02_scaffold_2044_24
AR11, Woesearchaeaota, DPANN, Archaea

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21202..21942
DNA (741bp) protein (247aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=AR11
purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5045875 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
rifcsphigho2_02_scaffold_2044_25

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21936..22895
DNA (960bp) protein (320aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5045873 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=15
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
rifcsphigho2_02_scaffold_2044_26

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22900..24282
DNA (1383bp) protein (461aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
fumarate lyase
rifcsphigho2_02_scaffold_2044_27
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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24279..25280
DNA (1002bp) protein (334aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] id=5091580 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Phosphoribosylaminoimidazolecarboxamide formyltransferase, 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000313|EMBL:KKP38783.1}; EC=6.3.4.- {ECO:000031
phosphoribosylaminoimidazolecarboxamide formyltransferase
rifcsphigho2_02_scaffold_2044_28

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25337..26446
DNA (1110bp) protein (370aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51655.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
rifcsphigho2_02_scaffold_2044_29
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

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26506..28029
DNA (1524bp) protein (508aa)
GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
rmr:Rmar_0677 GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=36187 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
guaA; GMP synthase (EC:6.3.5.2)
rifcsphigho2_02_scaffold_2044_30
unknown

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28103..28747
DNA (645bp) protein (215aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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