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rifcsphigho2_02_scaffold_7896

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7896_1
CG_Woesearch_01, Woesearchaeota, Archaea

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179..3649
DNA (3471bp) protein (1157aa)
chromosome segregation ATPase; K03529 chromosome segregation protein Tax=CG_Woesearch_01
chromosome segregation ATPase; K03529 chromosome segregation protein id=5044048 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
chromosome segregation protein SMC
rifcsphigho2_02_scaffold_7896_2
unknown

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3751..4197
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_3
unknown

Not on your lists

4283..4588
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_4

Not on your lists

comp(4578..5903)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
Putative hydrolase {ECO:0000313|EMBL:KHO53043.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_02_scaffold_7896_5
unknown

Not on your lists

comp(5960..6286)
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_6
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


6412..7902
DNA (1491bp) protein (497aa)
Glycyl-tRNA synthetase (EC:6.1.1.14)
hypothetical protein Tax=CG_Woesearch_03
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7896_7
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7894..8298)
DNA (405bp) protein (135aa)
Nuclease (SNase domain protein) n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E865_METMS
Nuclease {ECO:0000313|EMBL:KGK99043.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
nuclease (SNase domain protein)
rifcsphigho2_02_scaffold_7896_8
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(8306..9259)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A638_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ18729.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
lactate dehydrogenase-like oxidoreductase
rifcsphigho2_02_scaffold_7896_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9256..9879)
DNA (624bp) protein (208aa)
NAD(P)H nitroreductase (EC:1.-.-.-)
NAD(P)H nitroreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JEZ6_9EURY
NAD(P)H nitroreductase {ECO:0000313|EMBL:EJN58814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
rifcsphigho2_02_scaffold_7896_10
unknown

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comp(10153..10425)
DNA (273bp) protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_trna_1
unknown

Not on your lists

10297..10424
DNA (128bp)
transferRNA
rifcsphigho2_02_scaffold_7896_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

10481..10759
DNA (279bp) protein (93aa)
AbrB family transcriptional regulator id=5041622 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
AbrB family transcriptional regulator Tax=AR4
AbrB family transcriptional regulator
rifcsphigho2_02_scaffold_7896_12

Not on your lists

10753..11001
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54983.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein id=5041621 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_7896_13
Parcubacteria bacterium GW2011_GWB1_43_6, Parcubacteria, Bacteria

Not on your lists

comp(11034..11474)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB8F
Uncharacterized protein {ECO:0000313|EMBL:KKT16231.1}; TaxID=1618872 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_6.;"
hypothetical protein
rifcsphigho2_02_scaffold_7896_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11514..12731)
DNA (1218bp) protein (406aa)
AAA ATPase central domain-containing protein; K04800 replication factor C large subunit Tax=CG_Woesearch_01
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
replication factor C large subunit
rifcsphigho2_02_scaffold_7896_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12894..13673)
DNA (780bp) protein (260aa)
nitroreductase Tax=CG_Woesearch_02
nitroreductase id=5044666 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_7896_16
unknown

Not on your lists

13805..13945
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_17
unknown

Not on your lists

13942..14496
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_18
unknown

Not on your lists

14534..15751
DNA (1218bp) protein (406aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_19

Not on your lists

comp(15687..16688)
DNA (1002bp) protein (334aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:KHO49440.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_02_scaffold_7896_20
unknown

Not on your lists

16785..17510
DNA (726bp) protein (242aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_21
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17609..18115
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368C3CA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKS13608.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
rifcsphigho2_02_scaffold_7896_22
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

18112..18540
DNA (429bp) protein (143aa)
id=5048504 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR19
rifcsphigho2_02_scaffold_7896_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

18537..20279
DNA (1743bp) protein (581aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376C7D7
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_7896_24
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20394..20777
DNA (384bp) protein (128aa)
Putative oxidoreductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_16_Ignavibacteria_34_14_curated
msrB; peptide methionine sulfoxide reductase (EC:1.8.4.11)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000363339D
rifcsphigho2_02_scaffold_7896_25
unknown

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comp(20781..21032)
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21046..22077)
DNA (1032bp) protein (344aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
Phosphoesterase, DHHA1 id=5044037 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_7896_27
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

22195..22656
DNA (462bp) protein (154aa)
id=5800737 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_02_scaffold_7896_28
unknown

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22762..23808
DNA (1047bp) protein (349aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7896_29
unknown

Not on your lists

comp(23843..23968)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 30 items

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