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rifcsphigho2_02_scaffold_7955

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7955_1

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3..1253
DNA (1251bp) protein (417aa)
nrdJ1; ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=1249701 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:EQB62564.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
rifcsphigho2_02_scaffold_7955_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1401..1934
DNA (534bp) protein (178aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase id=14426450 bin=bin1_lowGC species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
Cob(I)alamin adenosyltransferase Tax=CSP1_2_Dadabacteria
rifcsphigho2_02_scaffold_7955_3

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1936..2388
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_7955_4
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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2532..2957
DNA (426bp) protein (142aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=5095804 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
rifcsphigho2_02_scaffold_7955_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(2986..3450)
DNA (465bp) protein (155aa)
AsnC family transcriptional regulator Tax=RBG_13_Woesearchaeota_36_6_curated
AsnC family transcriptional regulator id=5045866 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AsnC family transcriptional regulator
rifcsphigho2_02_scaffold_7955_6

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3597..4520
DNA (924bp) protein (308aa)
hypothetical protein
phosphate uptake regulator id=5045865 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphate uptake regulator {ECO:0000313|EMBL:KHO46478.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_7955_7

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comp(4517..4714)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Marine sediment metagenome DNA, contig: S01H1_S00836 {ECO:0000313|EMBL:GAF92383.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit N
rifcsphigho2_02_scaffold_7955_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4722..5123)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsphigho2_02_scaffold_7955_9

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comp(5120..5527)
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L13P id=4922284 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L13P
rifcsphigho2_02_scaffold_7955_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5529..5888)
DNA (360bp) protein (120aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=CG_Woesearch_02
50S ribosomal protein L18e
rifcsphigho2_02_scaffold_7955_11
unknown

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comp(5899..6195)
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7955_trna_1
unknown

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comp(6218..6325)
DNA (108bp)
transferRNA
rifcsphigho2_02_scaffold_7955_12
unknown

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comp(6373..6555)
DNA (183bp) protein (61aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7955_13
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6703..7155)
DNA (453bp) protein (151aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, alpha subunit/40 kD subunit Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit D
rifcsphigho2_02_scaffold_7955_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(7155..7553)
DNA (399bp) protein (133aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsphigho2_02_scaffold_7955_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(7540..8085)
DNA (546bp) protein (182aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHM2_THEBM
30S ribosomal protein S4 Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S9e (S4p)
rifcsphigho2_02_scaffold_7955_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(8091..8660)
DNA (570bp) protein (190aa)
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 Tax=CG_Woesearch_02
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
rifcsphigho2_02_scaffold_7955_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8708..9040)
DNA (333bp) protein (111aa)
Nascent polypeptide-associated complex protein id=5800198 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nascent polypeptide-associated complex protein Tax=AR15
Nascent polypeptide-associated complex protein
rifcsphigho2_02_scaffold_7955_18
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(9111..9269)
DNA (159bp) protein (53aa)
id=5047306 Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_7955_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


9412..12105
DNA (2694bp) protein (898aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
leucyl-tRNA synthetase (EC:6.1.1.4)
rifcsphigho2_02_scaffold_7955_20
CG_Woesearch_02, Woesearchaeota, Archaea

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12102..12881
DNA (780bp) protein (260aa)
inorganic polyphosphate/ATP-NAD Kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=CG_Woesearch_02
Uncharacterized protein id=5800808 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
inorganic polyphosphate/ATP-NAD Kinase
rifcsphigho2_02_scaffold_7955_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13421..14317)
DNA (897bp) protein (299aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_7955_22
unknown

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comp(14349..14708)
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7955_23

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14754..15197
DNA (444bp) protein (148aa)
exosome subunit; K07581 hypothetical protein id=5048514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45548.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_7955_24
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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15451..16119
DNA (669bp) protein (223aa)
tktA; transketolase subunit A (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH21_9CLOT
Tax=BJP_08E140C01_Clostridiales_46_19
rifcsphigho2_02_scaffold_7955_25

Not on your lists

16112..17044
DNA (933bp) protein (311aa)
Transketolase {ECO:0000313|EMBL:KHO46506.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KHO46506.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036B2501
rifcsphigho2_02_scaffold_7955_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17120..17443)
DNA (324bp) protein (108aa)
id=4744551 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_7955_27
unknown

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comp(17440..17652)
DNA (213bp) protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7955_28
unknown

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18026..18691
DNA (666bp) protein (222aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7955_29
unknown

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18669..18959
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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