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rifcsphigho2_02_scaffold_2044_33

Organism: RIFCSPHIGHO2_02_FULL_Woesearchaeota_45_15

near complete RP 35 / 55 MC: 7 BSCG 8 / 51 ASCG 33 / 38 MC: 1
Location: 30327..30686

Top 3 Functional Annotations

Value Algorithm Source
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 118.0
  • Bit_score: 142
  • Evalue 3.50e-31
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 131.0
  • Bit_score: 124
  • Evalue 9.10e-26
replication factor A1 similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 94.0
  • Bit_score: 103
  • Evalue 4.70e-20

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Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 360
ATGAAAATATCTGAATTGAAGCCGAGGCAGGGCAGCGTTGAGGTAACTGGAGAGATTGTTGAGGTGGAAGAAGCCAGGATGTTCAACAAGTTCGGAAAAGAAGGGCGGGTGGCAAATGCTGTTCTTAAGGACGAGTCAGGACAGATTAAGCTGACTTTGTGGAATGAACAGGCGGATCAGGTGAAGCAGGGAAGCAAGGTAACGATAAAAAACGGGTATGTAAACGAGTGGCAGGGAGAGATGCAGCTCACAACAGGAAAGTTCGGGCAGCTTGAAGTCCTGCCGGAAGCAGGCCAGGTTGAGGAAGTCAAAGAAAAGGATGAAGCGGAAGAAGTTGAAGAAGAACCGCTTGGGGAGTAG
PROTEIN sequence
Length: 120
MKISELKPRQGSVEVTGEIVEVEEARMFNKFGKEGRVANAVLKDESGQIKLTLWNEQADQVKQGSKVTIKNGYVNEWQGEMQLTTGKFGQLEVLPEAGQVEEVKEKDEAEEVEEEPLGE*