ggKbase home page

rifcsphigho2_12_scaffold_6940

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_6940_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003689004
Hef nuclease; K10896 fanconi anemia group M protein Tax=RBG_13_Woesearchaeota_36_6_curated
helicase
rifcsphigho2_12_scaffold_6940_2

Not on your lists

comp(521..1042)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003689004
Fanconi anemia group M protein {ECO:0000313|EMBL:KHO52140.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Helicase protein
rifcsphigho2_12_scaffold_6940_3
unknown

Not on your lists

comp(1096..2040)
DNA (945bp) protein (315aa)

This feature has no annotations

rifcsphigho2_12_scaffold_6940_4

Not on your lists

comp(2138..2359)
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO52108.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
regulatory protein MarR id=5046824 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_12_scaffold_6940_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

2557..2847
DNA (291bp) protein (97aa)
id=5046822 Tax=CG_Woesearch_01
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_12_scaffold_6940_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2919..3530
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
metallophosphoesterase Tax=CG_Woesearch_02
Metallophosphoesterase
rifcsphigho2_12_scaffold_6940_7

Not on your lists

3696..5906
DNA (2211bp) protein (737aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] id=5048888 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; Flags: Fragment;; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA topoisomerase 1
rifcsphigho2_12_scaffold_6940_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5909..6520)
DNA (612bp) protein (204aa)
radB; DNA repair and recombination protein RadB; K04484 DNA repair protein RadB Tax=RBG_13_Pacearchaeota_33_26_curated
DNA repair and recombination protein RadB; K04484 DNA repair protein RadB id=5048885 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
radB; DNA repair and recombination protein RadB
rifcsphigho2_12_scaffold_6940_9

Not on your lists

6677..7030
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376420B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62477.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_6940_10
unknown

Not on your lists

7020..9308
DNA (2289bp) protein (763aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037925B2
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4W9_METSW Tax=AR20
AAA family ATPase, CDC48 subfamily
rifcsphigho2_12_scaffold_6940_11
unknown

Not on your lists

9358..9717
DNA (360bp) protein (120aa)

This feature has no annotations

rifcsphigho2_12_scaffold_6940_12

Not on your lists

comp(9849..10739)
DNA (891bp) protein (297aa)
methionine aminopeptidase, type II (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5048875 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
Methionine aminopeptidase
rifcsphigho2_12_scaffold_6940_13
unknown

Not on your lists

10793..11182
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsphigho2_12_scaffold_6940_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11182..12192
DNA (1011bp) protein (337aa)
flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=AR18
flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5048872 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Flap endonuclease 1
rifcsphigho2_12_scaffold_6940_15
unknown

Not on your lists

comp(12189..13703)
DNA (1515bp) protein (505aa)

This feature has no annotations

rifcsphigho2_12_scaffold_6940_16
unknown

Not on your lists

comp(13700..14455)
DNA (756bp) protein (252aa)

This feature has no annotations

Displaying 16 items

View Taxonomy