ggKbase home page

rifcsphigho2_12_scaffold_11957_6

Organism: RIFCSPHIGHO2_12_FULL_Archaea_Woesearchaeota_30_20

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 31 / 38
Location: 5700..6857

Top 3 Functional Annotations

Value Algorithm Source
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 401.0
  • Bit_score: 303
  • Evalue 2.70e-79
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 400.0
  • Bit_score: 303
  • Evalue 3.80e-79
Replication factor C large subunit similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 366.0
  • Bit_score: 259
  • Evalue 1.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 1158
ATGATGTGGACAGACAAATATATACCTGAATTAAAAGAAATCCCTCACCAAAGAGAGATAGATCTAATTATACAATATTTAAAAGAAAAAATCCCTGTTTTATTATACGGCCCAACAGGTGTAGGAAAAACTACTTCAATAATTAAAATTGCAAAAGATCACAACTATGAACTATTAGAAATTAACGCATCTGATAAAAGAAATAAATCTGAAATAGAAACTTTAATTGGAAATGCAACACAACAATTGAGCTTATTCGGCGGGAAAAAACTAATTCTTTTAGATGAGATAGATGGGCTCTCAGGAACACAGGATAAAGGTGGAATTGCAGCGTTGACAAAAATCATCTCTAAAACCAAAGCGCACATCGTAATGACATGCAATGAAATAGAAAATGATAAAATTAAATCTTTAAAGAAAAAATGTAAAATCATAGAATTCAAACCTAACACAACTCAAGAAATAAGTTTAATTTTAAAAGAGATTGCAAAAAAAGAAAATATCACTTTTAAAGATTCGGAAATTTCAAGTCTAGCAAGGAGAAGTAATGGTGATATCAGGGGAGCAATTATAGATTTACAAGTAAATTCCACATTAGAGAATAATTTAGACCTAACAGATCTAAGTAATAGAGAAAATAAAGGTGAAATCATAAATGCGTTAACACTTATCTTCAAATCTAAAGATTTCAACACAACATCACAGTCCCTTACTAATATAGACTTAGATCCTAACGAATGTTTTTTATGGATTGAATATAATTTACCAAAAGAATATACAAAAACAGAAGATATTTATCAGGGCATTAAGAAATTATCAAAAGCAGATATTTTCAAATCAAGAATTATTAGAAGACAGTATTTTAGATTCTTAATTTACCAAAGCATACTTATGACAGCAGGTGTTGCATTAGCAAAAAAAGAGAAATATTCTCTAAAACCAAGTTATAAAAAAACCTCAAGACTCTTAAAAATATGGATGGCAAACCAAAGAAATCATAAGAAAAAATTGATTGCAGAAAAAATATCAATCCACACTCACTGCTCAATTAATCATGCCATTAAGACCTACCCTCACTATAAAAAGTTCTTAGTAAAGAAGAGTATAATCAAACAACTAGACCTCAGTGACGACGAAATTGAATACTTAAATAAATAA
PROTEIN sequence
Length: 386
MMWTDKYIPELKEIPHQREIDLIIQYLKEKIPVLLYGPTGVGKTTSIIKIAKDHNYELLEINASDKRNKSEIETLIGNATQQLSLFGGKKLILLDEIDGLSGTQDKGGIAALTKIISKTKAHIVMTCNEIENDKIKSLKKKCKIIEFKPNTTQEISLILKEIAKKENITFKDSEISSLARRSNGDIRGAIIDLQVNSTLENNLDLTDLSNRENKGEIINALTLIFKSKDFNTTSQSLTNIDLDPNECFLWIEYNLPKEYTKTEDIYQGIKKLSKADIFKSRIIRRQYFRFLIYQSILMTAGVALAKKEKYSLKPSYKKTSRLLKIWMANQRNHKKKLIAEKISIHTHCSINHAIKTYPHYKKFLVKKSIIKQLDLSDDEIEYLNK*