ggKbase home page

rifcsphigho2_12_scaffold_11957_7

Organism: RIFCSPHIGHO2_12_FULL_Archaea_Woesearchaeota_30_20

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 31 / 38
Location: 6913..7203

Top 3 Functional Annotations

Value Algorithm Source
nucleic acid binding OB-fold tRNA/helicase-type Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 93.0
  • Bit_score: 122
  • Evalue 3.90e-25
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 92.0
  • Bit_score: 119
  • Evalue 1.40e-24
replication factor A1 similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 92.0
  • Bit_score: 97
  • Evalue 1.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 291
ATGGGAGATAAAATAAAAGATTTACAACCTAAACAGGGAAAAATCATTCTTCACGCTGATGTAATTGAAGTCAGTAACGCAAAAGAATTTACTAAATTTGGAAAAATAGGAAGGGTTGCAAATGCAACAATAAAGGATGATACGGGGAAAATAAAATTAACTTTATGGAATGATGAGATTGATAAAATTAAAGCTGGTTCCAAAATAAAAATACAAAATGGTTATGTAAATGAATGGCAAGGAGAAAAACAGATTACAGCAGGAAGATTTGGGTCAATTGACCTAATTTAA
PROTEIN sequence
Length: 97
MGDKIKDLQPKQGKIILHADVIEVSNAKEFTKFGKIGRVANATIKDDTGKIKLTLWNDEIDKIKAGSKIKIQNGYVNEWQGEKQITAGRFGSIDLI*