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rifoxya1_full_scaffold_7480

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_7480_1

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comp(80..418)
DNA (339bp) protein (113aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO49173.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO49173.1};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
rifoxya1_full_scaffold_7480_2
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(423..716)
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDL8_METVM
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methano
50S ribosomal protein L21e
rifoxya1_full_scaffold_7480_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(751..2103)
DNA (1353bp) protein (451aa)
signal recognition particle Tax=CG_Woesearch_02
Signal recognition particle 54 kDa protein alias=AR15_final_v5_1212 id=5800735 tax=GW2011_AR15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta
SRP54-type protein, GTPase protein
rifoxya1_full_scaffold_7480_4

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comp(2109..3131)
DNA (1023bp) protein (341aa)
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO49891.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
Signal recognition particle GTPase
Signal recognition particle GTPase alias=gwa2_scaffold_32_264 id=5040132 tax=GW2011_AR20 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_7480_5

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comp(3133..3555)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A12F9
Marine sediment metagenome DNA, contig: S06H3_L04061 {ECO:0000313|EMBL:GAI04216.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Prefoldin subunit alpha
rifoxya1_full_scaffold_7480_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3629..4312)
DNA (684bp) protein (228aa)
Translation initiation factor 6 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A266_THESM
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococc
translation initiation factor IF-6
rifoxya1_full_scaffold_7480_7

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comp(4463..4729)
DNA (267bp) protein (89aa)
50S ribosomal protein L31, large subunit ribosomal protein L31e {ECO:0000313|EMBL:KHO45172.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e alias=gwa2_scaffold_3385_12 id=5049181 tax=GW2011_AR3 species=Methanopyrus kandleri genus=Methanopyrus taxon_order=Methanopyrales taxon_class=Methanopyri phylum=Euryarchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L31
rifoxya1_full_scaffold_7480_8

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comp(4729..4908)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9
Uncharacterized protein {ECO:0000313|EMBL:KHO49757.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
rifoxya1_full_scaffold_7480_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4905..5321)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036953AC
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e Tax=AR11
ribosomal protein S19e
rifoxya1_full_scaffold_7480_10
unknown

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comp(5359..6735)
DNA (1377bp) protein (459aa)

This feature has no annotations

rifoxya1_full_scaffold_7480_11

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comp(6742..7641)
DNA (900bp) protein (300aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
seg alias=AR15_final_v5_660 id=5800183 tax=GW2011_AR15
Displaying 11 items

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