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rifcsplowo2_12_scaffold_435

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_435_1

Not on your lists

comp(3..539)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45249.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
id=5047431 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_435_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

662..1168
-----------------
DNA (507bp)
protein (169aa)
Transcriptional regulator, PadR-like family n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RH25_ARCPA
PadR family transcriptional regulator
PadR family transcriptional regulator Tax=CG_Woesearch_02
rifcsplowo2_12_scaffold_435_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

1165..1866
-----------------
DNA (702bp)
protein (234aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transport system protein
rifcsplowo2_12_scaffold_435_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1869..3122
-----------------
DNA (1254bp)
protein (418aa)
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5800241 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_12_scaffold_435_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3126..4352
-----------------
DNA (1227bp)
protein (409aa)
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=AR11
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_12_scaffold_435_6

Not on your lists

4349..5560
-----------------
DNA (1212bp)
protein (404aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49326.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5800243 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
hypothetical protein
rifcsplowo2_12_scaffold_435_7
unknown

Not on your lists

5634..6620
-----------------
DNA (987bp)
protein (329aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=Q12YU3_METBU id=5103542 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=Q12YU3_METBU Tax=AR20
ABC transporter, ATPase subunit
rifcsplowo2_12_scaffold_435_8
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6617..7360
-----------------
DNA (744bp)
protein (248aa)
Daunorubicin resistance ABC transporter, inner membrane subunit B n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S0I3_9EURY
Daunorubicin resistance ABC transporter, inner membrane subunit B {ECO:0000313|EMBL:EJG07336.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae;
ABC efflux pump, inner membrane subunit
rifcsplowo2_12_scaffold_435_9
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7393..8463
-----------------
DNA (1071bp)
protein (357aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:AEG19033.1}; EC=1.1.5.2 {ECO:0000313|EMBL:AEG19033.1};; Flags: Precursor;; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanoba
Quinoprotein glucose dehydrogenase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D1W1_METSW
rifcsplowo2_12_scaffold_435_10
unknown

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8644..9267
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_11
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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9260..12331
-----------------
DNA (3072bp)
protein (1024aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
id=5047410 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_435_12
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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12428..16987
-----------------
DNA (4560bp)
protein (1520aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
id=5048008 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
parallel beta-helix repeat-containing protein
rifcsplowo2_12_scaffold_435_13
unknown

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16984..17160
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_14
unknown

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comp(17166..17333)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17391..17690)
-----------------
DNA (300bp)
protein (100aa)
transcriptional regulator PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
Transcriptional regulator PadR family protein id=5800323 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcriptional regulator PadR family transcriptional regulator
rifcsplowo2_12_scaffold_435_16

Not on your lists

17876..18037
-----------------
DNA (162bp)
protein (54aa)
seg id=5800322 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61653.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_12_scaffold_435_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18147..18755
-----------------
DNA (609bp)
protein (203aa)
Nitroreductase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GJE8_METPE
nitroreductase Tax=AR11
nitroreductase
rifcsplowo2_12_scaffold_435_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18791..20308)
-----------------
DNA (1518bp)
protein (506aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PMP4_9DELT rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EPX63727.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;"
AMP-dependent synthetase/ligase
rifcsplowo2_12_scaffold_435_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(20490..21488)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein Tax=CG_Pacearch_06
rifcsplowo2_12_scaffold_435_trna_2
unknown

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comp(21511..21598)
-----------------
DNA (88bp)
transferRNA
rifcsplowo2_12_scaffold_435_20
unknown

Not on your lists

21744..22406
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_21

Not on your lists

22449..24197
-----------------
DNA (1749bp)
protein (583aa)
ATP-binding cassette, sub-family E, member 1 {ECO:0000313|EMBL:KHO44990.1}; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATPase RIL; K06174 ATP-binding cassette, sub-family E, member 1 id=5050209 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ABC transporter
rifcsplowo2_12_scaffold_435_22
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(24198..24761)
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein; K09120 hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K09120 hypothetical protein id=5047421 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_12_scaffold_435_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24765..25382)
-----------------
DNA (618bp)
protein (206aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C779_SPHTD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACZ39725.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sou
rifcsplowo2_12_scaffold_435_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25384..26295)
-----------------
DNA (912bp)
protein (304aa)
Uncharacterized protein Tax=AR11
Putative uncharacterized protein id=3524323 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_12_scaffold_435_25
unknown

Not on your lists

26410..26928
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_26

Not on your lists

27144..28973
-----------------
DNA (1830bp)
protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=2017820 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rifcsplowo2_12_scaffold_435_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

29035..29499
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=uncultured bacterium 405006-B04 RepID=S4W813_9BACT
N-acetyltransferase GCN5 Tax=AR11
N-acetyltransferase GCN5
rifcsplowo2_12_scaffold_435_28
unknown

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29609..30310
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

rifcsplowo2_12_scaffold_435_29
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

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comp(30359..30949)
-----------------
DNA (591bp)
protein (197aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
Beta-lactamase-like id=4489176 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Beta-lactamase-like
Displaying items 1-30 of 62 in total

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