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rifoxyb1_full_scaffold_1154

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1154_1

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comp(1..1269)
-----------------
DNA (1269bp)
protein (423aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B47CF7
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:KHO51554.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
diguanylate cyclase
diguanylate cyclase
rifoxyb1_full_scaffold_1154_2
AR18, Woesearchaeaota, DPANN, Archaea

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1352..3736
-----------------
DNA (2385bp)
protein (795aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=AR18
Valine-tRNA ligase
Valine-tRNA ligase
rifoxyb1_full_scaffold_1154_3
AR17, Woesearchaeaota, DPANN, Archaea

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3775..5262
-----------------
DNA (1488bp)
protein (496aa)
Peptide chain release factor subunit 1 n=8 Tax=Thermococcus RepID=RF1_THEON id=5103314 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptide chain release factor subunit 1 Tax=AR17
Peptide chain release factor subunit 1
Peptide chain release factor subunit 1
rifoxyb1_full_scaffold_1154_4
AR17, Woesearchaeaota, DPANN, Archaea

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5321..6037
-----------------
DNA (717bp)
protein (239aa)
Segregation and condensation protein B n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH90_9EURY id=5103315 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Segregation and condensation protein B Tax=AR17
Segregation and condensation protein B
Segregation and condensation protein B
rifoxyb1_full_scaffold_1154_5
AR17, Woesearchaeaota, DPANN, Archaea

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6034..7497
-----------------
DNA (1464bp)
protein (488aa)
hypothetical protein
Oligosaccharyl transferase STT3 subunit Tax=AR17
id=5103316 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyb1_full_scaffold_1154_6
AR17, Woesearchaeaota, DPANN, Archaea

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7463..8866
-----------------
DNA (1404bp)
protein (468aa)
hypothetical protein
hypothetical protein Tax=AR17
id=5103317 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyb1_full_scaffold_1154_7
unknown

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8859..10091
-----------------
DNA (1233bp)
protein (411aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY Tax=AR20
Glycosyltransferase involved in cell wall biogenesis
Glycosyltransferase involved in cell wall biogenesis
rifoxyb1_full_scaffold_1154_8
unknown

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10085..10735
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY id=5103319 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY Tax=AR20
hypothetical protein
rifoxyb1_full_scaffold_1154_9
CG_Pacearch_01, Pacearchaeota, Archaea

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10719..12095
-----------------
DNA (1377bp)
protein (459aa)
Putative uncharacterized protein n=5 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAF4_9EURY id=5103320 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=CG_Pacearch_01
rifoxyb1_full_scaffold_1154_10

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comp(12054..13340)
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein id=5800035 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61366.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-protein mannosyltransferase
rifoxyb1_full_scaffold_1154_11
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(13428..14858)
-----------------
DNA (1431bp)
protein (477aa)
hypothetical protein Tax=CG_Woesearch_03
Hypothetical cytosolic protein id=4530970 bin=GWC2_Deltaproteobacteria_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1154_12
unknown

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comp(14891..15202)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_13
unknown

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15248..16525
-----------------
DNA (1278bp)
protein (426aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_14
unknown

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16525..17256
-----------------
DNA (732bp)
protein (244aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_15
unknown

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comp(17275..18171)
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_16
unknown

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18302..19225
-----------------
DNA (924bp)
protein (308aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_17

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19315..20319
-----------------
DNA (1005bp)
protein (335aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAS3_METIK id=5103126 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Nucleic acid binding OB-fold tRNA/helicase-type
Nucleic acid binding OB-fold tRNA/helicase-type
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:AJF62407.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_1154_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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20372..21661
-----------------
DNA (1290bp)
protein (430aa)
cartilage oligomeric matrix protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rifoxyb1_full_scaffold_1154_19
unknown

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comp(21695..22009)
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_20
AR17, Woesearchaeaota, DPANN, Archaea

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comp(22209..22970)
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR17
rifoxyb1_full_scaffold_1154_21
AR15, Woesearchaeaota, DPANN, Archaea

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comp(23138..23443)
-----------------
DNA (306bp)
protein (102aa)
seg id=5799608 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifoxyb1_full_scaffold_1154_22
unknown

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comp(23440..23958)
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

rifoxyb1_full_scaffold_1154_23
unknown

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comp(23978..24196)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

Displaying 23 items

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