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rifoxyb1_full_scaffold_1558

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1558_1
unknown

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89..214
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifoxyb1_full_scaffold_1558_2

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comp(222..752)
-----------------
DNA (531bp)
protein (177aa)
zpr1-related zinc finger protein; K06874 zinc finger protein id=5050957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Zinc finger protein {ECO:0000313|EMBL:KHO53235.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ZPR1-like protein zinc finger protein
ZPR1-like protein zinc finger protein
rifoxyb1_full_scaffold_1558_3

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comp(790..1203)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
Uncharacterized protein {ECO:0000313|EMBL:KHO51403.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1558_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1295..1528)
-----------------
DNA (234bp)
protein (78aa)
UPF0147 protein MY1_0261 n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU31_9ARCH
hypothetical protein
hypothetical protein
hypothetical protein; K09721 hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
rifoxyb1_full_scaffold_1558_5

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comp(1512..1928)
-----------------
DNA (417bp)
protein (139aa)
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Prefoldin subunit beta
Prefoldin subunit beta
rifoxyb1_full_scaffold_1558_6

Not on your lists

comp(1870..2007)
-----------------
DNA (138bp)
protein (46aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S17826 {ECO:0000313|EMBL:GAG16421.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5103032 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifoxyb1_full_scaffold_1558_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2012..2224)
-----------------
DNA (213bp)
protein (71aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM id=5103031 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae Tax=CG_Woesearch_02
50S ribosomal protein L37Ae
50S ribosomal protein L37Ae
rifoxyb1_full_scaffold_1558_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2438..3118)
-----------------
DNA (681bp)
protein (227aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
LSU ribosomal protein L11P
LSU ribosomal protein L11P
rifoxyb1_full_scaffold_1558_9

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comp(3227..3697)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
LSU ribosomal protein L24A Rpl24A
LSU ribosomal protein L24A Rpl24A
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_1558_10

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comp(3701..3898)
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829297
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579365 species="Archaea.;" source="a
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1558_11
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3946..5049)
-----------------
DNA (1104bp)
protein (368aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=5050968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR18
Cell division protein FtsZ
Cell division protein FtsZ
rifoxyb1_full_scaffold_1558_12

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comp(5101..5745)
-----------------
DNA (645bp)
protein (215aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFB4_9EURY id=5103026 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifoxyb1_full_scaffold_1558_13
unknown

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5796..6050
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifoxyb1_full_scaffold_1558_14

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6087..6488
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C3751
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A
Translation initiation factor 5A
rifoxyb1_full_scaffold_1558_15
CG_Pacearch_06, Pacearchaeota, Archaea

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6491..6667
-----------------
DNA (177bp)
protein (59aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371BD09
hypothetical protein
id=5103024 Tax=CG_Pacearch_06
rifoxyb1_full_scaffold_1558_16
AR18, Woesearchaeaota, DPANN, Archaea

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6717..7910
-----------------
DNA (1194bp)
protein (398aa)
peptidase m50 id=5050972 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase m50 Tax=AR18
Peptidase M50
Peptidase M50
rifoxyb1_full_scaffold_1558_17
unknown

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comp(7913..8173)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifoxyb1_full_scaffold_1558_18

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comp(8209..9105)
-----------------
DNA (897bp)
protein (299aa)
tRNA (Guanine10-N2)-dimethyltransferase {ECO:0000313|EMBL:KHO52635.1}; EC=2.1.1.213 {ECO:0000313|EMBL:KHO52635.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
RNA methylase
rifoxyb1_full_scaffold_1558_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9102..9773)
-----------------
DNA (672bp)
protein (224aa)
RNA methyltransferase, trmh family, group 1 Tax=AR17
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rRNA methylase
rRNA methylase
rifoxyb1_full_scaffold_1558_20
AR17, Woesearchaeaota, DPANN, Archaea

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9827..10552
-----------------
DNA (726bp)
protein (242aa)
hydrolase, tatd family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=AR17
yabD; TatD-related deoxyribonuclease YabD; K03424 TatD DNase family protein [EC:3.1.21.-] id=5042290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hydrolase, TatD family
Hydrolase, TatD family
rifoxyb1_full_scaffold_1558_21
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10610..11002
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE69884.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
rifoxyb1_full_scaffold_1558_22
AR17, Woesearchaeaota, DPANN, Archaea

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comp(10999..12702)
-----------------
DNA (1704bp)
protein (568aa)
UPF0313 protein ANASTE_01509 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC09_9FIRM
hypothetical protein Tax=AR17
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1558_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12796..13590
-----------------
DNA (795bp)
protein (265aa)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MG60_9CLOT
hypothetical protein Tax=AR17
tRNA-dihydrouridine synthase
tRNA-dihydrouridine synthase
rifoxyb1_full_scaffold_1558_24
AR17, Woesearchaeaota, DPANN, Archaea

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13614..14156
-----------------
DNA (543bp)
protein (181aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=AR17
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aspartyl-tRNA(Asn) amidotransferase, B subunit
aspartyl-tRNA(Asn) amidotransferase, B subunit
Displaying 24 items

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