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cg1_0.2_scaffold_2405_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2405_c_1
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_2
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

283..390
DNA (108bp) protein (36aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_trna_1
unknown

Not on your lists

446..552
DNA (107bp)
transferRNA
cg1_0.2_scaffold_2405_c_3
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

800..1039
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8V2_UNCMA rbh
hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_2405_c_4
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

1036..1305
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8V1_UNCMA rbh
hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_2405_c_5
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

1302..2300
DNA (999bp) protein (333aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_6
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

2340..3080
DNA (741bp) protein (247aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_7
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3117..4214
DNA (1098bp) protein (366aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=CG_Micra_04
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECT4_PYRF1 rbh
cg1_0.2_scaffold_2405_c_8
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

4216..4509
DNA (294bp) protein (98aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_9
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(4493..5065)
DNA (573bp) protein (191aa)
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Sulfolobus acidocaldarius RepID=M1IAN9_9CREN
peptidylprolyl isomerase FKBP-type Tax=CG_Micra_04
peptidylprolyl isomerase FKBP-type
cg1_0.2_scaffold_2405_c_10
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

5254..5364
DNA (111bp) protein (37aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_2405_c_11
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

5480..6181
DNA (702bp) protein (234aa)
thymidylate synthase, flavin-dependent (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=CG_Micra_04
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LDY2_9FIRM rbh
cg1_0.2_scaffold_2405_c_12
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

6178..7395
DNA (1218bp) protein (406aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=CG_Micra_04
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1) id=5240824 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
cg1_0.2_scaffold_2405_c_trna_2
unknown

Not on your lists

7424..7498
DNA (75bp)
transferRNA
cg1_0.2_scaffold_2405_c_13
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

7650..8135
DNA (486bp) protein (162aa)
Cytidine deaminase-like 11..137 Tax=CG_Micra_04
Cytidine deaminase-like 11..137 id=131896 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
cg1_0.2_scaffold_2405_c_14
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(8139..8990)
DNA (852bp) protein (284aa)
cation efflux family protein Tax=CG_Micra_04
cation efflux protein id=1242652 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
cation efflux family protein
cg1_0.2_scaffold_2405_c_15
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

9119..9400
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEZ9_METFS rbh
hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_2405_c_16
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(9397..10584)
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=CG_Micra_04
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme id=5800455 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
cg1_0.2_scaffold_2405_c_17
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

10709..11737
DNA (1029bp) protein (343aa)
Probable L-threonine 3-dehydrogenase n=1 Tax=Pyrococcus sp. ST04 RepID=I3REL7_9EURY rbh
L-threonine 3-dehydrogenase Tax=CG_Micra_04
L-threonine 3-dehydrogenase
cg1_0.2_scaffold_2405_c_18
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(11897..13546)
DNA (1650bp) protein (550aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGM7_9EURY rbh
SecD-like protein-export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Micra_04
SecD-like protein-export membrane protein
cg1_0.2_scaffold_2405_c_19
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13543..14664)
DNA (1122bp) protein (374aa)
Preprotein translocase, subunit SecF n=1 Tax=mine drainage metagenome RepID=T1AWN3_9ZZZZ rbh
SecD/SecF/SecDF export membrane protein; K03074 preprotein translocase subunit SecF Tax=CG_Micra_04
preprotein translocase subunit SecF
cg1_0.2_scaffold_2405_c_20
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(14929..15900)
DNA (972bp) protein (324aa)
homospermidine synthase (EC:2.5.1.45); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=CG_Micra_04
homospermidine synthase (EC:2.5.1.45)
Homospermidine synthase (Spermidine-specific) n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SR06_PLABD rbh
cg1_0.2_scaffold_2405_c_21
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(16016..16948)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBC9_9ARCH rbh
elongation factor Tu domain-containing protein Tax=CG_Micra_04
elongation factor Tu domain-containing protein
cg1_0.2_scaffold_2405_c_22
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(16935..17432)
DNA (498bp) protein (166aa)
ArsR family transcriptional regulator n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J8S9_METBM
ArsR family transcriptional regulator Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_2405_c_23
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists


comp(17438..18724)
DNA (1287bp) protein (429aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Micra_04
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGB9_9EURY rbh
cg1_0.2_scaffold_2405_c_24
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(18740..19054)
DNA (315bp) protein (105aa)
Potassium channel protein n=2 Tax=Methanosarcina mazei RepID=M1Q0U7_METMZ rbh
potassium channel protein Tax=CG_Micra_04
Potassium channel protein
cg1_0.2_scaffold_2405_c_trna_3
unknown

Not on your lists

comp(19273..19345)
DNA (73bp)
transferRNA
cg1_0.2_scaffold_2405_c_25
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

19408..19590
DNA (183bp) protein (61aa)
Tax=CG_Micra_04
Displaying 28 items

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