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cg_0.2_sub10_scaffold_577_c

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_577_c_1
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

2..265
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase Tax=CG_Pacearch_01
transposase
cg_0.2_sub10_scaffold_577_c_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

342..503
DNA (162bp) protein (54aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_577_c_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(500..1390)
DNA (891bp) protein (297aa)
RNA polymerase sigma-B factor; K03089 RNA polymerase sigma-32 factor Tax=CG_Pacearch_06
RNA polymerase sigma-B factor; K03089 RNA polymerase sigma-32 factor id=14426512 bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
RNA polymerase sigma-B factor
cg_0.2_sub10_scaffold_577_c_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1506..1649)
DNA (144bp) protein (48aa)
alias=gwa2_scaffold_226_63 Tax=CG_Pacearch_06
alias=gwa2_scaffold_226_63 id=18248965 bin=AR5_curated_draft species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
cg_0.2_sub10_scaffold_577_c_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1827..2774
DNA (948bp) protein (316aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5103397 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
transposase Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2827..3957
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363A152
hypothetical protein Tax=CG_Pacearch_06
SAP protein
cg_0.2_sub10_scaffold_577_c_trna_1
unknown

Not on your lists

4086..4216
DNA (131bp)
transferRNA
cg_0.2_sub10_scaffold_577_c_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4373..5002
DNA (630bp) protein (210aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_577_c_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5014..5508)
DNA (495bp) protein (165aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_577_c_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5585..6325)
DNA (741bp) protein (247aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Pacearch_06
yabD; TatD-related deoxyribonuclease YabD; K03424 TatD DNase family protein [EC:3.1.21.-] id=5042290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hydrolase, TatD family
cg_0.2_sub10_scaffold_577_c_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6376..6990
DNA (615bp) protein (205aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=CG_Pacearch_06
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZL6_FERPA rbh
cg_0.2_sub10_scaffold_577_c_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

7031..8233
DNA (1203bp) protein (401aa)
FAD dependent oxidoreductase n=1 Tax=uncultured bacterium RepID=K1XM05_9BACT
hydroxyglutarate oxidase Tax=CG_Pacearch_06
hydroxyglutarate oxidase
cg_0.2_sub10_scaffold_577_c_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8233..8529
DNA (297bp) protein (99aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=CG_Pacearch_06
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cysteine methyltransferase
cg_0.2_sub10_scaffold_577_c_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8559..9545
DNA (987bp) protein (329aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_577_c_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9542..10858)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDZ5_9EURY rbh
hypothetical protein Tax=CG_Pacearch_06
GTPase
cg_0.2_sub10_scaffold_577_c_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10859..11206)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTB9_METAC id=5103800 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11203..11481)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis RepID=G0H4T0_METMI id=5103799 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11570..12781)
DNA (1212bp) protein (404aa)
argD1; acetylornithine aminotransferase (EC:2.6.1.11) Tax=CG_Pacearch_06
4-aminobutyrate aminotransferase family protein (EC:2.6.1.19)
Putative Acetylornithine aminotransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU0_9ARCH rbh
cg_0.2_sub10_scaffold_577_c_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12778..13281)
DNA (504bp) protein (168aa)
Bifunctional deaminase-reductase protein n=1 Tax=uncultured bacterium RepID=K2CK81_9BACT
bifunctional deaminase-reductase domain-containing protein Tax=CG_Pacearch_06
Bifunctional deaminase-reductase protein
cg_0.2_sub10_scaffold_577_c_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(13405..13665)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY rbh
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(13720..15177)
DNA (1458bp) protein (486aa)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=CG_Pacearch_06
aldH; aldehyde dehydrogenase NAD+ (EC:1.2.1.3)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] id=5241608 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cg_0.2_sub10_scaffold_577_c_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(15219..15962)
DNA (744bp) protein (248aa)
putative Purine-nucleoside phosphorylase (EC:2.4.2.1)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360405F
purine or other phosphorylase family 1 Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_577_c_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16005..16415)
DNA (411bp) protein (137aa)
Protein containing Nucleotide binding protein, PINc domain n=1 Tax=sediment metagenome RepID=D9PJC5_9ZZZZ
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16416..16649)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_577_c_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16722..17345)
DNA (624bp) protein (208aa)
Tax=CG_Pacearch_06
Displaying 25 items

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