ggKbase home page

CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2..841
DNA (840bp) protein (280aa)
UPF0095 protein Arcve_0273 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_2
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

844..1410
DNA (567bp) protein (189aa)
cyclophilin Tax=Spongiibacter tropicus RepID=UPI0003B7007D
ppiB; cyclophilin type peptidyl-prolyl cis-trans isomerase
Tax=CG_Micra_01
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_3
unknown

Not on your lists

comp(1411..2292)
DNA (882bp) protein (294aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_4

Not on your lists

comp(2361..3569)
DNA (1209bp) protein (403aa)
replication factor C large subunit; K04800 replication factor C large subunit bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256|HAMAP-Rule:MF_01508}; species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor C large subunit
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_5
MPI_TA06_32_111, Bacteria

Not on your lists

comp(3605..4906)
DNA (1302bp) protein (434aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=MPI_TA06_32_111
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4896..5999)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4H0_METSW
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_7
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(6061..6573)
DNA (513bp) protein (171aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SRP8_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL58765.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
DoxX family protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6682..7878
DNA (1197bp) protein (399aa)
GTPase domain-containing protein; K06942 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_9
unknown

Not on your lists

comp(7880..8359)
DNA (480bp) protein (160aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_trna_1
unknown

Not on your lists

8434..8507
DNA (74bp)
transferRNA Trp
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_10
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

8652..9191
DNA (540bp) protein (180aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_11
unknown

Not on your lists

comp(9206..11617)
DNA (2412bp) protein (804aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_5573_c_12
unknown

Not on your lists

comp(11667..11981)
DNA (315bp) protein (105aa)

This feature has no annotations

Displaying 13 items

View Taxonomy