ggKbase home page

CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c

Search features with annotation key words

Displaying items 1-30 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_1

Not on your lists

comp(7..333)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PEW4_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S01645 {ECO:0000313|EMBL:GAF87119.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_2
unknown

Not on your lists

comp(361..534)
DNA (174bp) protein (58aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

572..1093
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribosomal-protein-alanine acetyltransferase
Tax=AR18
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1090..2559)
DNA (1470bp) protein (490aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AMP phosphorylase
Tax=CG_Pacearch_06
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2691..3719)
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_03
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3772..4491
DNA (720bp) protein (240aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Pacearch_03
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_7

Not on your lists


4628..5617
DNA (990bp) protein (330aa)
50S ribosomal protein L3 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Large subunit ribosomal protein L3 {ECO:0000313|EMBL:AJS12899.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


5623..6414
DNA (792bp) protein (264aa)
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L4
Tax=CG_Pacearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


6411..6668
DNA (258bp) protein (86aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
50S ribosomal protein L23P
Tax=CG_Pacearch_05
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


6673..7410
DNA (738bp) protein (246aa)
50S ribosomal protein L2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L8e (L2p)
Tax=CG_Pacearch_05
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_11

Not on your lists


7410..7808
DNA (399bp) protein (133aa)
30S ribosomal protein S19 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RS19_METMA
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S15e (S19p)
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_12

Not on your lists


8681..8977
DNA (297bp) protein (99aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GU95_9ZZZZ
30S ribosomal protein S3, small subunit ribosomal protein S3 {ECO:0000313|EMBL:AJS12985.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8958..9164
DNA (207bp) protein (69aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9166..9468
DNA (303bp) protein (101aa)
Protein translation factor SUI1 homolog Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGH6_ARCPA
translation initiation factor SUI1
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_15

Not on your lists


9482..9817
DNA (336bp) protein (112aa)
30S ribosomal protein S17P Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RS17_ARCFU
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S11e (S17p)
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


9814..10215
DNA (402bp) protein (134aa)
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
Tax=CG_Pacearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_17

Not on your lists


10220..10633
DNA (414bp) protein (138aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10614..11249
DNA (636bp) protein (212aa)
30S ribosomal protein S4e Tax=Methanobacterium formicicum DSM 3637 RepID=K2R415_METFO
30S ribosomal protein S4e
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_19

Not on your lists


11246..11758
DNA (513bp) protein (171aa)
50S ribosomal protein L5 Tax=Methanotorris RepID=F6BD87_METIK bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12806.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_20

Not on your lists


11760..11990
DNA (231bp) protein (77aa)
SSU ribosomal protein S14P Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QB90_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO48875.1}; species="Archaea.;" source="archaeon GW2011_AR1.;"
SSU ribosomal protein S14P
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_21

Not on your lists


11995..12369
DNA (375bp) protein (125aa)
30S ribosomal protein S8P Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA70_9EURY
30S ribosomal protein S8 {ECO:0000313|EMBL:AJS12805.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_22

Not on your lists


12371..12928
DNA (558bp) protein (186aa)
50S ribosomal protein L6 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXV8_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_23
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12925..13260
DNA (336bp) protein (112aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_24
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

13257..13661
DNA (405bp) protein (135aa)
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Pacearch_05
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_25

Not on your lists


13658..14164
DNA (507bp) protein (169aa)
50S ribosomal protein L18P Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXW1_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
large subunit ribosomal protein L18
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_26
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


14161..15018
DNA (858bp) protein (286aa)
30S ribosomal protein S5
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RBG_13_Pacearchaeota_33_26_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_27

Not on your lists


15015..15434
DNA (420bp) protein (140aa)
50S ribosomal protein L30P Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL30_ARCFU
Marine sediment metagenome DNA, contig: S01H1_L01049 {ECO:0000313|EMBL:GAF74108.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L30P, archaeal
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_28

Not on your lists


15434..15892
DNA (459bp) protein (153aa)
50S ribosomal protein L15P Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15P
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_29
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

15905..17290
DNA (1386bp) protein (462aa)
Protein translocase subunit SecY Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Tax=CG_Pacearch_03
CG10_big_fil_rev_8_21_14_0.10_scaffold_3758_c_30
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

17324..17728
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_03
Displaying items 1-30 of 43 in total

View Taxonomy