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CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_1
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..291
-----------------
DNA (291bp)
protein (97aa)
dtdp-4-dehydrorhamnose reductase bin=GWF2_Bacteroidetes_33_38 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
dtdp-4-dehydrorhamnose reductase
Tax=GWF2_Bacteroidetes_33_38_curated
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_2

Not on your lists

comp(288..1247)
-----------------
DNA (960bp)
protein (320aa)
Methyltransferase type 11 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TM96_MARTH
Uncharacterized protein {ECO:0000313|EMBL:KHO47131.1}; species="Archaea.;" source="archaeon GW2011_AR1.;"
methyltransferase type 11
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_3

Not on your lists

comp(1211..1444)
-----------------
DNA (234bp)
protein (78aa)
Marine sediment metagenome DNA, contig: S12H4_S03124 {ECO:0000313|EMBL:GAJ02242.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_4
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1383..2408)
-----------------
DNA (1026bp)
protein (342aa)
Tax=AR1
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_5
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2412..3296)
-----------------
DNA (885bp)
protein (295aa)
Putative glycosyltransferase bin=GWC2_Elusimicrobia_64_44 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
family 2 glycosyl transferase
Tax=AR1
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3302..4165)
-----------------
DNA (864bp)
protein (288aa)
Glycosyl transferase, family 2 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YCS2_AERPE
glycosyl transferase
Tax=RBG_16_Pacearchaeota_35_8_curated
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_7
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(4190..5263)
-----------------
DNA (1074bp)
protein (358aa)
glycosyltransferase, family 9 (heptosyltransferase) bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_8
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(5330..6127)
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003690227
FkbM family methyltransferase
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_9
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(6222..8726)
-----------------
DNA (2505bp)
protein (835aa)
I WGS project CAKM00000000 data, strain SE8, contig 279 Tax=Pneumocystis jiroveci (strain SE8) RepID=L0PFJ0_PNEJ8 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_10
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(8751..9233)
-----------------
DNA (483bp)
protein (161aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_11
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(9234..10757)
-----------------
DNA (1524bp)
protein (508aa)
SecD/SecF/SecDF export membrane protein Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SecD/SecF/SecDF export membrane protein
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10754..11635)
-----------------
DNA (882bp)
protein (294aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_13
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

12251..12586
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein Tax=Halovirus HGTV-1 RepID=R4TL67_9VIRU
hypothetical protein
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_14
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

12946..13230
-----------------
DNA (285bp)
protein (95aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_15
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(13200..13385)
-----------------
DNA (186bp)
protein (62aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_16
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(13426..13623)
-----------------
DNA (198bp)
protein (66aa)
DNA-directed RNA polymerase subunit N Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=AR1
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_17
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

13763..13915
-----------------
DNA (153bp)
protein (51aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_18
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists


13980..14246
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
50S ribosomal protein L21
Tax=AR1
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_19
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

14243..14533
-----------------
DNA (291bp)
protein (97aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_20
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

14539..15075
-----------------
DNA (537bp)
protein (179aa)
DNA-binding protein Tax=Pyrococcus RepID=Q8TZW3_PYRFU bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_21
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


15077..15610
-----------------
DNA (534bp)
protein (178aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S13
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_22
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


15607..16065
-----------------
DNA (459bp)
protein (153aa)
30S ribosomal protein S4 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rps4p; 30S ribosomal protein S4
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_23
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


16067..16588
-----------------
DNA (522bp)
protein (174aa)
30S ribosomal protein S11 Tax=Thermococcus zilligii RepID=UPI000299D2B8
rps11p; 30S ribosomal protein S11
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_24
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

16604..16903
-----------------
DNA (300bp)
protein (100aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_25
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

16907..17623
-----------------
DNA (717bp)
protein (239aa)
DNA-directed RNA polymerase, subunit D Tax=nanoarchaeote Nst1 RepID=R1G3G0_9ARCH
RNA polymerase insert
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_26
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(18207..18512)
-----------------
DNA (306bp)
protein (102aa)
Tax=CG_Pacearch_01
CG11_big_fil_rev_8_21_14_0.20_scaffold_3008_c_27
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(18578..18913)
-----------------
DNA (336bp)
protein (112aa)
Tax=CG_Pacearch_01
Displaying 27 items

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