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GD18-4_B1_scaffold_170031

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_170031_1
unknown

Not on your lists

comp(142..261)
DNA (120bp) protein (40aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_2
unknown

Not on your lists

comp(592..1881)
DNA (1290bp) protein (430aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_3
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1911..2381)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D4988B
anti-sigma regulatory factor, serine/threonine protein kinase
Tax=RBG_13_Planctomycetes_46_10_curated
GD18-4_B1_scaffold_170031_4
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2381..3382)
DNA (1002bp) protein (334aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
RNA 3'-phosphate cyclase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBN3_METMS
GD18-4_B1_scaffold_170031_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(3578..3952)
DNA (375bp) protein (125aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
GD18-4_B1_scaffold_170031_6
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

4305..4871
DNA (567bp) protein (189aa)
hypothetical protein
id=5103861 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR19
GD18-4_B1_scaffold_170031_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

4865..5338
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103860 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR19
GD18-4_B1_scaffold_170031_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5510..6052
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D7568
hypothetical protein
Tax=CG_Pacearch_05
GD18-4_B1_scaffold_170031_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6049..7839)
DNA (1791bp) protein (597aa)
Radical SAM n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139C1_RHOPS
radical SAM family protein
Tax=RBG_16_Planctomycetes_64_12_curated
GD18-4_B1_scaffold_170031_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

8006..8578
DNA (573bp) protein (191aa)
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY id=5103472 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease
Tax=AR20
GD18-4_B1_scaffold_170031_11
unknown

Not on your lists

comp(8575..8979)
DNA (405bp) protein (135aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9121..9441
DNA (321bp) protein (107aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=5084595 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
GD18-4_B1_scaffold_170031_13
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

9502..10023
DNA (522bp) protein (174aa)
coiled-coil id=5044072 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
GD18-4_B1_scaffold_170031_14
unknown

Not on your lists

10023..10388
DNA (366bp) protein (122aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


10428..12188
DNA (1761bp) protein (587aa)
Alanine--tRNA ligase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RSZ5_SPHGB id=5102916 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Alanine-tRNA ligase
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_170031_16
unknown

Not on your lists

comp(12230..12439)
DNA (210bp) protein (70aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_17
unknown

Not on your lists

comp(12396..12671)
DNA (276bp) protein (92aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_18
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12789..12944)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YWY6_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ34909.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
GD18-4_B1_scaffold_170031_19
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13107..13709
DNA (603bp) protein (201aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV4_METFV id=5103481 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA (pseudouridine(54)-N(1))-methyltransferase
Tax=AR20
GD18-4_B1_scaffold_170031_20

Not on your lists

comp(13713..14129)
DNA (417bp) protein (139aa)
transmembrane_regions 9..27 id=69391 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66514.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
GD18-4_B1_scaffold_170031_21
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14131..14463)
DNA (333bp) protein (111aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003685065
Blue (Type 1) copper protein
Tax=CG_Magasa_01
GD18-4_B1_scaffold_170031_22
unknown

Not on your lists

comp(14498..14839)
DNA (342bp) protein (114aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_23

Not on your lists

14982..19985
DNA (5004bp) protein (1668aa)
chromosome segregation ATPase; K03529 chromosome segregation protein id=5049716 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Chromosome segregation protein {ECO:0000313|EMBL:KHO53573.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
chromosome segregation protein SMC
GD18-4_B1_scaffold_170031_24
unknown

Not on your lists

comp(20003..20500)
DNA (498bp) protein (166aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_25
unknown

Not on your lists

comp(20563..20784)
DNA (222bp) protein (74aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_26
unknown

Not on your lists

comp(20825..21301)
DNA (477bp) protein (159aa)

This feature has no annotations

GD18-4_B1_scaffold_170031_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21360..22727)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR20
GD18-4_B1_scaffold_170031_trna_3
unknown

Not on your lists

comp(22906..22979)
DNA (74bp)
transferRNA Trp
GD18-4_B1_scaffold_170031_28
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23069..23746)
DNA (678bp) protein (226aa)
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
GD18-4_B1_scaffold_170031_29

Not on your lists

comp(23743..24402)
DNA (660bp) protein (220aa)
id=5045767 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54434.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Displaying items 1-30 of 138 in total

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