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GD18-4_B1_scaffold_234630

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_234630_1
unknown

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2..892
DNA (891bp) protein (297aa)

This feature has no annotations

GD18-4_B1_scaffold_234630_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1258..1878
DNA (621bp) protein (207aa)
id=5045782 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_234630_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1862..2335
DNA (474bp) protein (158aa)
id=5045781 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_234630_4

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comp(2424..2831)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A12F9
Prefoldin subunit alpha
Marine sediment metagenome DNA, contig: S06H3_L04061 {ECO:0000313|EMBL:GAI04216.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GD18-4_B1_scaffold_234630_5
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(2828..3445)
DNA (618bp) protein (206aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P883_METFA
50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349, ECO:0000313|EMBL:AIJ06085.1}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. JH146.;"
GD18-4_B1_scaffold_234630_6

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comp(3461..3910)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62557.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_234630_7
AR17, Woesearchaeaota, DPANN, Archaea

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comp(3910..5346)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B7C1F
Protein translocase subunit SecY
Tax=AR17
GD18-4_B1_scaffold_234630_8

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comp(5343..5762)
DNA (420bp) protein (140aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
GD18-4_B1_scaffold_234630_9

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comp(5764..6240)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CE9
50S ribosomal protein L30P
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_234630_10

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comp(6242..6946)
DNA (705bp) protein (235aa)
30S ribosomal protein S5 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS5_NANEQ id=5103272 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000313|EMBL:AJF62553.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_234630_11
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(6950..7474)
DNA (525bp) protein (175aa)
50S ribosomal protein L18P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV1_FERPA
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
GD18-4_B1_scaffold_234630_12
AR17, Woesearchaeaota, DPANN, Archaea

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comp(7452..7922)
DNA (471bp) protein (157aa)
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e id=5046857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L19e
Tax=AR17
GD18-4_B1_scaffold_234630_13
AR20, Woesearchaeaota, DPANN, Archaea

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comp(7919..8476)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037197A6
50S ribosomal protein L32e
Tax=AR20
GD18-4_B1_scaffold_234630_14

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comp(8481..9008)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F6817
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12577.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6
GD18-4_B1_scaffold_234630_15

Not on your lists


comp(9010..9402)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8
GD18-4_B1_scaffold_234630_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9412..9642)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5046853 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
SSU ribosomal protein S14P
Tax=CG_Woesearch_03
GD18-4_B1_scaffold_234630_17

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comp(9639..10148)
DNA (510bp) protein (170aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12385.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
GD18-4_B1_scaffold_234630_18
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10145..10825)
DNA (681bp) protein (227aa)
30S ribosomal protein S4e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD1_METFV id=5103264 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4e
Tax=AR20
GD18-4_B1_scaffold_234630_19
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10794..11207)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_234630_20

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comp(11209..11610)
DNA (402bp) protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5041769 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L14P
GD18-4_B1_scaffold_234630_21

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comp(11582..11938)
DNA (357bp) protein (119aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5046848 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS12078.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
GD18-4_B1_scaffold_234630_22
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(11935..12177)
DNA (243bp) protein (81aa)
Ribonuclease P protein component 1 {ECO:0000255|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000255|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000255|HAMAP-Rule:MF_00754}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Ribonuclease P protein component 1 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RNP1_METKA
POP4_2; RNAse P subunit P29
GD18-4_B1_scaffold_234630_23

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comp(12178..12486)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367012D
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
translation initiation factor Sui1
GD18-4_B1_scaffold_234630_24
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(12486..12722)
DNA (237bp) protein (79aa)
50S ribosomal protein L29P n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXU8_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
50S ribosomal protein L29
GD18-4_B1_scaffold_234630_25

Not on your lists


comp(12700..13443)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E06F8
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3
GD18-4_B1_scaffold_234630_26

Not on your lists


comp(13440..13862)
DNA (423bp) protein (141aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L22P
GD18-4_B1_scaffold_234630_27

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comp(13864..14253)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036287C9
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rps19p; 30S ribosomal protein S19
GD18-4_B1_scaffold_234630_28

Not on your lists


comp(14253..14978)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003710343
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl2p; 50S ribosomal protein L2P
GD18-4_B1_scaffold_234630_29
unknown

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comp(14980..15315)
DNA (336bp) protein (112aa)

This feature has no annotations

GD18-4_B1_scaffold_234630_30
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(15317..15568)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48
50S ribosomal protein L23P
Tax=CG_Woesearch_02
Displaying items 1-30 of 121 in total

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