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GD18-4_B1_scaffold_472468

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_472468_1
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1514
DNA (1512bp) protein (504aa)
chi; Exochitinase 1 (EC:3.2.1.14)
Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UXC9_MONBE
Uncharacterized protein {ECO:0000313|EMBL:EWM54562.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
GD18-4_B1_scaffold_472468_2

Not on your lists

comp(1636..6285)
DNA (4650bp) protein (1550aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52495.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5049521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
GD18-4_B1_scaffold_472468_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6285..6755)
DNA (471bp) protein (157aa)
hypothetical protein
id=5103336 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
GD18-4_B1_scaffold_472468_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6762..7088)
DNA (327bp) protein (109aa)
id=5049519 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR17
GD18-4_B1_scaffold_472468_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(7513..7794)
DNA (282bp) protein (94aa)
hypothetical protein id=5050137 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Pacearch_06
GD18-4_B1_scaffold_472468_6

Not on your lists

comp(7846..11208)
DNA (3363bp) protein (1121aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52495.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5049516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
GD18-4_B1_scaffold_472468_7
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11247..11990)
DNA (744bp) protein (248aa)
hypothetical protein; K04802 proliferating cell nuclear antigen id=5044991 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA polymerase sliding clamp
Tax=AR17
GD18-4_B1_scaffold_472468_8
unknown

Not on your lists

comp(12051..13874)
DNA (1824bp) protein (608aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_9
unknown

Not on your lists

comp(13876..14628)
DNA (753bp) protein (251aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_10

Not on your lists

14733..15206
DNA (474bp) protein (158aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
Zn-ribbon containing protein {ECO:0000313|EMBL:AJF62293.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_472468_11
unknown

Not on your lists

15317..15628
DNA (312bp) protein (104aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15641..17470)
DNA (1830bp) protein (610aa)
ERCC2/XPD/Rad3-related DNA repair helicase; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] id=5045763 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ATP dependent helicase
Tax=AR17
GD18-4_B1_scaffold_472468_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17536..17823)
DNA (288bp) protein (96aa)
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription-associated protein TFIIS
Tax=AR17
GD18-4_B1_scaffold_472468_14

Not on your lists

comp(17895..18479)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52520.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
GD18-4_B1_scaffold_472468_15

Not on your lists

comp(18519..18794)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
GD18-4_B1_scaffold_472468_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18834..19442)
DNA (609bp) protein (203aa)
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_472468_17

Not on your lists

comp(19439..19909)
DNA (471bp) protein (157aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQL5_ACIS0 id=5103321 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62602.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_472468_18
unknown

Not on your lists

comp(19949..20593)
DNA (645bp) protein (215aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_19
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(20595..21251)
DNA (657bp) protein (219aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
GD18-4_B1_scaffold_472468_20
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(21245..22474)
DNA (1230bp) protein (410aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis
Tax=RBG_16_Micrarchaeota_36_9_curated
GD18-4_B1_scaffold_472468_21
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22561..23121)
DNA (561bp) protein (187aa)
segregation and condensation protein B; K06024 segregation and condensation protein B id=5044965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Segregation and condensation protein B
Tax=AR18
GD18-4_B1_scaffold_472468_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(23153..24241)
DNA (1089bp) protein (363aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044964 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptide chain release factor
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_472468_23
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(24263..24703)
DNA (441bp) protein (147aa)
PilT protein domain protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XKU7_CALS8
PilT protein domain-containing protein
Tax=RBG_16_RIF03_38_10_curated
GD18-4_B1_scaffold_472468_24
unknown

Not on your lists

comp(24690..24935)
DNA (246bp) protein (82aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(25012..27363)
DNA (2352bp) protein (784aa)
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Valine-tRNA ligase
Tax=RBG_13_Pacearchaeota_33_26_curated
GD18-4_B1_scaffold_472468_26
unknown

Not on your lists

27534..27737
DNA (204bp) protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

27738..28061
DNA (324bp) protein (108aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_472468_28
unknown

Not on your lists

28106..28267
DNA (162bp) protein (54aa)

This feature has no annotations

GD18-4_B1_scaffold_472468_29

Not on your lists

28454..29089
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A9583
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62593.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_472468_30
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(29267..30526)
DNA (1260bp) protein (420aa)
Uncharacterized protein id=2130042 bin=GWD2_RBX1-related_39_127 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying items 1-30 of 53 in total

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