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GD18-4_B1_scaffold_1628496

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_1628496_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2..3283)
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQF7_9BACT
carboxypeptidase T
Tax=CG_Pacearch_06
GD18-4_B1_scaffold_1628496_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3267..4202)
DNA (936bp) protein (312aa)
UPI0003D1B3A9 related cluster n=1 Tax=unknown RepID=UPI0003D1B3A9
Cell surface protein
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_1628496_3
unknown

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comp(4199..4462)
DNA (264bp) protein (88aa)

This feature has no annotations

GD18-4_B1_scaffold_1628496_4
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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4601..4789
DNA (189bp) protein (63aa)
hypothetical protein id=18311514 bin=Haloredivivus tax=Haloredivivus
Tax=RBG_16_Micrarchaeota_49_10_curated
GD18-4_B1_scaffold_1628496_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

4771..5256
DNA (486bp) protein (162aa)
putative nucleic acid-binding protein, contains PIN domain id=18311513 bin=Haloredivivus tax=Haloredivivus
Tax=RBG_16_Micrarchaeota_49_10_curated
GD18-4_B1_scaffold_1628496_6
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5279..6769
DNA (1491bp) protein (497aa)
carboxypeptidase Taq (EC:3.4.17.19)
thermostable carboxypeptidase 1 (EC:3.4.17.19); K01299 carboxypeptidase Taq [EC:3.4.17.19] id=5241307 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Pacearch_05
GD18-4_B1_scaffold_1628496_7
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

6921..7376
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR
Tax=AR20
GD18-4_B1_scaffold_1628496_8

Not on your lists

7382..11668
DNA (4287bp) protein (1429aa)
Putative Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CBH74722.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH74722.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Ribonucleoside-diphosphate reductase n=1 Tax=mine drainage metagenome RepID=E6PE37_9ZZZZ
ribonucleotide-diphosphate reductase subunit alpha
GD18-4_B1_scaffold_1628496_9
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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11708..11977
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CFA55
Uncharacterized protein {ECO:0000313|EMBL:KKQ17636.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
GD18-4_B1_scaffold_1628496_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12030..12344
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0EAM6_CLOSO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
trxA; thioredoxin
GD18-4_B1_scaffold_1628496_11
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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12341..12913
DNA (573bp) protein (191aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] id=5097579 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
GD18-4_B1_scaffold_1628496_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

12942..13478
DNA (537bp) protein (179aa)
id=5049620 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
GD18-4_B1_scaffold_1628496_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13468..13836)
DNA (369bp) protein (123aa)
PIN domain protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q972K7_SULTO
hypothetical protein
Tax=AR6
GD18-4_B1_scaffold_1628496_14
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13796..14059)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R196_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK18006.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC; 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei).;"
GD18-4_B1_scaffold_1628496_15
unknown

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14173..14505
DNA (333bp) protein (111aa)

This feature has no annotations

GD18-4_B1_scaffold_1628496_16
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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14563..14826
DNA (264bp) protein (88aa)
Transcription regulator, SpoVT/AbrB family n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q8J2W0_PYRAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB74684.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
GD18-4_B1_scaffold_1628496_17
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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14799..15221
DNA (423bp) protein (141aa)
PilT protein-like protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSM9_METHJ
twitching motility protein PilT
Tax=RBG_16_Micrarchaeota_49_10_curated
GD18-4_B1_scaffold_1628496_18

Not on your lists

comp(15218..16045)
DNA (828bp) protein (276aa)
hypothetical protein id=5051051 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53188.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
GD18-4_B1_scaffold_1628496_19
unknown

Not on your lists

16241..16450
DNA (210bp) protein (70aa)

This feature has no annotations

GD18-4_B1_scaffold_1628496_20
GWC2_CPR2_39_10, CPR2, Bacteria

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16463..16915
DNA (453bp) protein (151aa)
peroxiredoxin Q/BCP (EC:1.11.1.15)
thiol peroxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A6904
Peroxiredoxin {ECO:0000313|EMBL:KKQ93410.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
GD18-4_B1_scaffold_1628496_21
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(16902..17540)
DNA (639bp) protein (213aa)
hypothetical protein; K03975 membrane-associated protein id=24413780 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
GD18-4_B1_scaffold_1628496_22

Not on your lists

comp(17537..18418)
DNA (882bp) protein (294aa)
hypothetical protein id=5049621 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53659.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
GD18-4_B1_scaffold_1628496_23
unknown

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19126..19728
DNA (603bp) protein (201aa)

This feature has no annotations

GD18-4_B1_scaffold_1628496_24

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comp(19768..20064)
DNA (297bp) protein (99aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rpl12p; 50S ribosomal protein L12P
GD18-4_B1_scaffold_1628496_25
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(20084..21103)
DNA (1020bp) protein (340aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
Ribosomal protein L10
GD18-4_B1_scaffold_1628496_26

Not on your lists


comp(21100..21870)
DNA (771bp) protein (257aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5049223 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45214.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
GD18-4_B1_scaffold_1628496_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(21992..22672)
DNA (681bp) protein (227aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
GD18-4_B1_scaffold_1628496_28
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(22680..23102)
DNA (423bp) protein (141aa)
Conserved domain protein id=2842020 bin=GWF2_Planctomycete_41_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
GD18-4_B1_scaffold_1628496_29
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(23150..23701)
DNA (552bp) protein (184aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_04
GD18-4_B1_scaffold_1628496_30
unknown

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comp(23717..23917)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying items 1-30 of 82 in total

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