ggKbase home page

GD18-4_B1_scaffold_2133456

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_2133456_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(3..92)
DNA (90bp) protein (30aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_2133456_2
unknown

Not on your lists

comp(188..469)
DNA (282bp) protein (94aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(575..967)
DNA (393bp) protein (131aa)
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S9
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_2133456_4

Not on your lists


comp(964..1377)
DNA (414bp) protein (138aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L13P
GD18-4_B1_scaffold_2133456_5
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1379..1741)
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
Tax=AR20
GD18-4_B1_scaffold_2133456_6
unknown

Not on your lists

comp(1862..2065)
DNA (204bp) protein (68aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_7
unknown

Not on your lists

2144..2506
DNA (363bp) protein (121aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_trna_1
unknown

Not on your lists

comp(2511..2615)
DNA (105bp)
transferRNA Undet
GD18-4_B1_scaffold_2133456_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2722..3267
DNA (546bp) protein (182aa)
seg id=5800818 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
GD18-4_B1_scaffold_2133456_9
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

3512..3868
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR03925.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
GD18-4_B1_scaffold_2133456_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3888..4658)
DNA (771bp) protein (257aa)
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_2133456_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(4771..5172)
DNA (402bp) protein (134aa)
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps11p; 30S ribosomal protein S11
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_2133456_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(5210..5848)
DNA (639bp) protein (213aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_2133456_13

Not on your lists


comp(5848..6348)
DNA (501bp) protein (167aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_2133456_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6464..7021)
DNA (558bp) protein (186aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_2133456_15

Not on your lists

comp(7025..7354)
DNA (330bp) protein (110aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_2133456_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(7407..7700)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
50S ribosomal protein L21e
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_2133456_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7747..8019)
DNA (273bp) protein (91aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
GD18-4_B1_scaffold_2133456_18
unknown

Not on your lists

8225..10927
DNA (2703bp) protein (901aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10966..11379)
DNA (414bp) protein (138aa)
id=5045770 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
GD18-4_B1_scaffold_2133456_20

Not on your lists

comp(11454..13133)
DNA (1680bp) protein (560aa)
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein {ECO:0000313|EMBL:AJF61999.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Histone acetyltransferase Elp3 like protein
GD18-4_B1_scaffold_2133456_21
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13187..14092
DNA (906bp) protein (302aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY id=5103042 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal peptide peptidase SppA, 36K type
Tax=AR20
GD18-4_B1_scaffold_2133456_22
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14389..14811)
DNA (423bp) protein (141aa)
NUDiX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] id=5050975 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
NUDIX hydrolase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
GD18-4_B1_scaffold_2133456_23
unknown

Not on your lists

comp(14847..15311)
DNA (465bp) protein (155aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_24
unknown

Not on your lists

comp(15564..15848)
DNA (285bp) protein (95aa)

This feature has no annotations

GD18-4_B1_scaffold_2133456_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15858..17159)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CD3F1
hypothetical protein
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_2133456_26

Not on your lists

17594..17866
DNA (273bp) protein (91aa)
Uncharacterized protein id=5048298 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54016.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
GD18-4_B1_scaffold_2133456_27

Not on your lists

17859..18227
DNA (369bp) protein (123aa)
PIN protein
PIN domain-containing protein id=5241434 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN protein {ECO:0000313|EMBL:AJF60425.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
GD18-4_B1_scaffold_2133456_28
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

18278..18586
DNA (309bp) protein (103aa)
Nucleotidyltransferase n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E87_9ARCH
DNA polymerase beta domain-containing protein region
Tax=RBG_16_Micrarchaeota_49_10_curated
GD18-4_B1_scaffold_2133456_29

Not on your lists

18605..18979
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E88_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN25680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 67 in total

View Taxonomy