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GD18-4_B1_scaffold_201423

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_201423_1
CG_Woesearch_01, Woesearchaeota, Archaea

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1..1671
DNA (1671bp) protein (557aa)
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_201423_2

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comp(1682..3364)
DNA (1683bp) protein (561aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
GD18-4_B1_scaffold_201423_3
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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3686..4357
DNA (672bp) protein (224aa)
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
GD18-4_B1_scaffold_201423_trna_1
unknown

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4343..4461
DNA (119bp)
transferRNA Gln
GD18-4_B1_scaffold_201423_4
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4603..5955)
DNA (1353bp) protein (451aa)
manB; phosphomannomutase/phosphoglucomutase ManB (EC:5.4.2.8 5.4.2.2)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036DBB97
Tax=S_Thermacetogenium_phaeum_55_64
GD18-4_B1_scaffold_201423_5

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comp(5993..6886)
DNA (894bp) protein (298aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mannose-1-phosphate guanylyltransferase, phosphomannomutase {ECO:0000313|EMBL:KHO45352.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KHO45352.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45352.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
GD18-4_B1_scaffold_201423_6
unknown

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6990..7109
DNA (120bp) protein (40aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_7
unknown

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comp(7112..7942)
DNA (831bp) protein (277aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_8

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8052..8360
DNA (309bp) protein (103aa)
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
GD18-4_B1_scaffold_201423_9
unknown

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8378..8740
DNA (363bp) protein (121aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_10
CG_Woesearch_02, Woesearchaeota, Archaea

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8821..10182
DNA (1362bp) protein (454aa)
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_201423_trna_2
unknown

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10327..10476
DNA (150bp)
transferRNA Pseudo
GD18-4_B1_scaffold_201423_11
AR11, Woesearchaeaota, DPANN, Archaea

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10573..12117
DNA (1545bp) protein (515aa)
Uncharacterized MFS-type transporter yusP n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGE2_9CHLR
putative drug transport protein
Tax=AR11
GD18-4_B1_scaffold_201423_12
unknown

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comp(12187..12672)
DNA (486bp) protein (162aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(12678..12839)
DNA (162bp) protein (54aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_201423_14

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12957..13838
DNA (882bp) protein (294aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5102900 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62181.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_201423_15
unknown

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13894..14085
DNA (192bp) protein (64aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_16
unknown

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14063..14506
DNA (444bp) protein (148aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_17
unknown

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comp(14490..15455)
DNA (966bp) protein (322aa)

This feature has no annotations

GD18-4_B1_scaffold_201423_18

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15626..15805
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ id=5103534 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62815.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
GD18-4_B1_scaffold_201423_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15915..17000
DNA (1086bp) protein (362aa)
DNA polymerase IV n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MNG6_9EURY
DNA-directed DNA polymerase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
GD18-4_B1_scaffold_201423_trna_3
unknown

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17076..17223
DNA (148bp)
transferRNA Glu
Displaying 22 items

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