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GD18-4_B1_scaffold_386082

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_386082_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2..253
-----------------
DNA (252bp)
protein (84aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17) id=14631510 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
ATP:cob(i)alamin adenosyltransferase
Tax=CSP1_3_Armatimonadetes
GD18-4_B1_scaffold_386082_2
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

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269..715
-----------------
DNA (447bp)
protein (149aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
GD18-4_B1_scaffold_386082_3
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(716..1387)
-----------------
DNA (672bp)
protein (224aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0M3_9BACT
Tax=RBG_13_Deltaproteobacteria_53_10_curated
GD18-4_B1_scaffold_386082_4
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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1464..1889
-----------------
DNA (426bp)
protein (142aa)
dUTPase n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037EE168
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
GD18-4_B1_scaffold_386082_5
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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1886..2830
-----------------
DNA (945bp)
protein (315aa)
L-lactate dehydrogenase (EC:1.1.1.27)
lactate dehydrogenase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DE6A
L-lactate dehydrogenase {ECO:0000313|EMBL:KKR78822.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
GD18-4_B1_scaffold_386082_6

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comp(2849..3403)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized MFS-type transporter YitZ id=3544392 bin=GWA1_ZB2_49_26 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW13627.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
permease of the major facilitator superfamily
GD18-4_B1_scaffold_386082_7
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

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comp(3441..4022)
-----------------
DNA (582bp)
protein (194aa)
Dihydropteroate synthase-related protein id=5800740 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tetrahydromethanopterin S-methyltransferase subunit A
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
GD18-4_B1_scaffold_386082_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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4101..4730
-----------------
DNA (630bp)
protein (210aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5050429 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
endonuclease III
Tax=RBG_16_Micrarchaeota_36_9_curated
GD18-4_B1_scaffold_386082_9
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4815..5537)
-----------------
DNA (723bp)
protein (241aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZK1_9BACT
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EES52023.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
oxidoreductase
GD18-4_B1_scaffold_386082_10
GWA2_OD1_58_9, Kaiserbacteria, Parcubacteria, Bacteria

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comp(5732..6403)
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Galdieria sulphuraria RepID=M2XYS1_GALSU
Uncharacterized protein {ECO:0000313|EMBL:KKW47120.1}; TaxID=1618672 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_58_9.;"
hypothetical protein
GD18-4_B1_scaffold_386082_11
CG_Micra_02, Micraarchaeota, Archaea

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6759..7604
-----------------
DNA (846bp)
protein (282aa)
Tax=CG_Micra_02
GD18-4_B1_scaffold_386082_trna_1
unknown

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7505..7590
-----------------
DNA (86bp)
transferRNA Gly
GD18-4_B1_scaffold_386082_12

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comp(7599..7901)
-----------------
DNA (303bp)
protein (101aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000377957E
Uncharacterized protein {ECO:0000313|EMBL:KKK67782.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
GD18-4_B1_scaffold_386082_13
unknown

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7980..9272
-----------------
DNA (1293bp)
protein (431aa)

This feature has no annotations

GD18-4_B1_scaffold_386082_14

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comp(9276..9551)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003813B47
Uncharacterized protein {ECO:0000313|EMBL:KHO50522.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
GD18-4_B1_scaffold_386082_15

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9710..10399
-----------------
DNA (690bp)
protein (230aa)
TraB family protein id=5049565 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TraB family protein {ECO:0000313|EMBL:KHO53741.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
TraB family protein
GD18-4_B1_scaffold_386082_16
unknown

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comp(10435..11010)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

GD18-4_B1_scaffold_386082_17
CG_Woesearch_01, Woesearchaeota, Archaea

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11163..11921
-----------------
DNA (759bp)
protein (253aa)
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_386082_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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11942..12277
-----------------
DNA (336bp)
protein (112aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
GD18-4_B1_scaffold_386082_19
CG_Woesearch_02, Woesearchaeota, Archaea

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12317..13867
-----------------
DNA (1551bp)
protein (517aa)
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_386082_20
CG_Woesearch_02, Woesearchaeota, Archaea

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13879..14532
-----------------
DNA (654bp)
protein (218aa)
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Hef nuclease
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_386082_21

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comp(14547..15368)
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
GD18-4_B1_scaffold_386082_22

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15563..17764
-----------------
DNA (2202bp)
protein (734aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein id=5800178 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Acetyl coenzyme A synthetase (ADP forming), alpha protein {ECO:0000313|EMBL:AJF61509.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
CoA-binding domain-containing protein
GD18-4_B1_scaffold_386082_23
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(17781..18800)
-----------------
DNA (1020bp)
protein (340aa)
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mRNA surveillance protein Pelota
Tax=CG_Woesearch_02
GD18-4_B1_scaffold_386082_24
CG_Woesearch_01, Woesearchaeota, Archaea

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18926..20122
-----------------
DNA (1197bp)
protein (399aa)
seg id=5041792 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_01
GD18-4_B1_scaffold_386082_25
unknown

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20188..20442
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

GD18-4_B1_scaffold_386082_26
RBG_16_Archaea_50_20_curated, Archaea

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20445..20786
-----------------
DNA (342bp)
protein (114aa)
Putative transcriptional modulator of MazE/toxin, MazF n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIK2_NITGG
putative transcriptional modulator of MazE/toxin, MazF
Tax=RBG_16_Archaea_50_20_curated
GD18-4_B1_scaffold_386082_27
unknown

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20856..22772
-----------------
DNA (1917bp)
protein (639aa)

This feature has no annotations

GD18-4_B1_scaffold_386082_28
unknown

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22788..23798
-----------------
DNA (1011bp)
protein (337aa)

This feature has no annotations

GD18-4_B1_scaffold_386082_29
unknown

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comp(23831..26485)
-----------------
DNA (2655bp)
protein (885aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

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