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S_p1_S3_coassembly_k141_616592

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_616592_1

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382..657
DNA (276bp) protein (92aa)
Marine sediment metagenome DNA, contig: S03H2_L04486 {ECO:0000313|EMBL:GAH38493.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_616592_2

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654..1007
DNA (354bp) protein (118aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59762.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_616592_3
unknown

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1413..1775
DNA (363bp) protein (121aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_4
AR9, Woesearchaeaota, DPANN, Archaea

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1829..2662
DNA (834bp) protein (278aa)
Tax=AR9
S_p1_S3_coassembly_k141_616592_5
AR15, Woesearchaeaota, DPANN, Archaea

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2819..6310
DNA (3492bp) protein (1164aa)
Chromosome partition protein Smc bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
Tax=AR15
S_p1_S3_coassembly_k141_616592_6

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6348..6752
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Halogranum salarium B-1 RepID=J2ZVB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKK51660.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_616592_7
unknown

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6754..7257
DNA (504bp) protein (168aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_8
CG_Woesearch_01, Woesearchaeota, Archaea

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7527..8555
DNA (1029bp) protein (343aa)
Probable tRNA pseudouridine synthase D bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA pseudouridine synthase D TruD
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_616592_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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8604..8918
DNA (315bp) protein (105aa)
transmembrane_regions 13..32 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
S_p1_S3_coassembly_k141_616592_10
AR17, Woesearchaeaota, DPANN, Archaea

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9215..9856
DNA (642bp) protein (214aa)
hypothetical protein bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=AR17
S_p1_S3_coassembly_k141_616592_11
GWA2_OD1_43_9, Magasanikbacteria, Parcubacteria, Bacteria

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9813..10298
DNA (486bp) protein (162aa)
Nuclear protein SET Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVW1_9EURY
Nuclear protein SET {ECO:0000313|EMBL:KKT24547.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_43_9.;"
nuclear protein SET
S_p1_S3_coassembly_k141_616592_12
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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10483..11001
DNA (519bp) protein (173aa)
NYN domain protein Tax=Bacteriovorax sp. Seq25_V RepID=T0SF06_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
S_p1_S3_coassembly_k141_616592_13
unknown

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11040..11537
DNA (498bp) protein (166aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_14
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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11627..12976
DNA (1350bp) protein (450aa)
Signal recognition particle 54 kDa protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
S_p1_S3_coassembly_k141_616592_15
unknown

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12988..13290
DNA (303bp) protein (101aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_16
unknown

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13821..13949
DNA (129bp) protein (43aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_17
unknown

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13946..14074
DNA (129bp) protein (43aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_18

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14049..14696
DNA (648bp) protein (216aa)
tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:KHO49190.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
Uncharacterized protein MJ0062 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Sua5/YciO/YrdC/YwlC family protein
S_p1_S3_coassembly_k141_616592_19

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comp(14718..15764)
DNA (1047bp) protein (349aa)
Peptidase M29 aminopeptidase II Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQE4_THELI
Uncharacterized protein {ECO:0000313|EMBL:KHO51148.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
peptidase M29 aminopeptidase II
S_p1_S3_coassembly_k141_616592_20
unknown

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comp(16008..16346)
DNA (339bp) protein (113aa)

This feature has no annotations

S_p1_S3_coassembly_k141_616592_21
AR9, Woesearchaeaota, DPANN, Archaea

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comp(16349..17302)
DNA (954bp) protein (318aa)
tRNA (Cytosine-48,49-C(5)-) methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
Tax=AR9
S_p1_S3_coassembly_k141_616592_22
unknown

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comp(17814..17894)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 22 items

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