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S_p1_S3_coassembly_k141_853425

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_853425_1
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

409..1146
DNA (738bp) protein (246aa)
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
S_p1_S3_coassembly_k141_853425_2

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comp(1154..1342)
DNA (189bp) protein (63aa)
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; species="Archaea.;" source="archaeon GW2011_AR16.;"
ribosomal protein S17e Rps17e; K02962 small subunit ribosomal protein S17e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S17e
S_p1_S3_coassembly_k141_853425_3
CG_Woesearch_03, Woesearchaeota, Archaea

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1488..1886
DNA (399bp) protein (133aa)
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_853425_4
unknown

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1915..2274
DNA (360bp) protein (120aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_5
unknown

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comp(2291..2965)
DNA (675bp) protein (225aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3199..3870)
DNA (672bp) protein (224aa)
UPF0758 protein MM_2791 Tax=Methanosarcina mazei RepID=Y2791_METMA
DNA repair protein RadC
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_853425_7
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

3973..4932
DNA (960bp) protein (320aa)
Putative uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D7K2_9ACTO bin=ACD80 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD80 organism_group=SR1
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
S_p1_S3_coassembly_k141_853425_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5273..5521
DNA (249bp) protein (83aa)
Transcriptional regulator, AbrB family bin=PER_GWC2_41_7 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AbrB family transcriptional regulator
Tax=AR4
S_p1_S3_coassembly_k141_853425_9
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5506..5841
DNA (336bp) protein (112aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003670EC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI74084.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
S_p1_S3_coassembly_k141_853425_10
unknown

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comp(5877..6179)
DNA (303bp) protein (101aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_11
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6371..7567)
DNA (1197bp) protein (399aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
S_p1_S3_coassembly_k141_853425_12

Not on your lists

7713..8267
DNA (555bp) protein (185aa)
XRE family transcriptional regulator bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO46373.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
putative transcription regulator, containing CBS protein
S_p1_S3_coassembly_k141_853425_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8316..9233)
DNA (918bp) protein (306aa)
Tax=AR17
S_p1_S3_coassembly_k141_853425_14
unknown

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comp(9230..10957)
DNA (1728bp) protein (576aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_15

Not on your lists

comp(10987..11898)
DNA (912bp) protein (304aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52141.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
S_p1_S3_coassembly_k141_853425_16
unknown

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comp(11901..13196)
DNA (1296bp) protein (432aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

13633..14739
DNA (1107bp) protein (369aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Reverse transcriptase
Tax=AR17
S_p1_S3_coassembly_k141_853425_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14724..15584)
DNA (861bp) protein (287aa)
Uncharacterized protein (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative phosphoserine phosphatase
Tax=AR15
S_p1_S3_coassembly_k141_853425_19
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(15674..15985)
DNA (312bp) protein (104aa)
50S ribosomal protein L12 Tax=Methanotorris igneus RepID=G1UBJ0_METIK
50S ribosomal protein L12
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
S_p1_S3_coassembly_k141_853425_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(16131..16970)
DNA (840bp) protein (280aa)
Ribosomal protein L10 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L10
Tax=AR15
S_p1_S3_coassembly_k141_853425_21

Not on your lists


comp(16972..17607)
DNA (636bp) protein (212aa)
rpl1P; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45773.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
50S ribosomal protein L1
S_p1_S3_coassembly_k141_853425_22
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17823..18050)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790562
Uncharacterized protein {ECO:0000313|EMBL:KKQ84166.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
S_p1_S3_coassembly_k141_853425_23
unknown

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comp(18296..18808)
DNA (513bp) protein (171aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_24

Not on your lists

comp(18949..20067)
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KHO53481.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Chaperone protein DnaJ bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chaperone protein DnaJ
S_p1_S3_coassembly_k141_853425_25
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20060..20710)
DNA (651bp) protein (217aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_853425_26
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20996..22867)
DNA (1872bp) protein (624aa)
molecular chaperone DnaK Tax=Alicyclobacillus pohliae RepID=UPI00036F6904
dnaK; molecular chaperone DnaK
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_853425_27
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22922..23536)
DNA (615bp) protein (205aa)
ABC transporter related protein bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Protein grpE
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_853425_28
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

23649..24050
DNA (402bp) protein (134aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_853425_29
unknown

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24255..24980
DNA (726bp) protein (242aa)

This feature has no annotations

S_p1_S3_coassembly_k141_853425_30
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24977..25840)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Methanobacterium sp. MB1 RepID=U6EE76_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIS31397.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
Displaying items 1-30 of 31 in total

View Taxonomy