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S_p1_S3_coassembly_k141_1401917

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1401917_1

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comp(1..1173)
DNA (1173bp) protein (391aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; species="Archaea.;" source="archaeon GW2011_AR16.;"
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glutamine amidotransferase Tax=Thermus islandicus RepID=UPI0003B62CB7
S_p1_S3_coassembly_k141_1401917_2
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

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comp(1250..1576)
DNA (327bp) protein (109aa)
Predicted protein Tax=Physcomitrella patens subsp. patens RepID=A9SVV9_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ64689.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella.;" source="Physcomitrella patens subsp. patens (Moss).;"
glutaredoxin-like protein
S_p1_S3_coassembly_k141_1401917_3
unknown

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1611..2096
DNA (486bp) protein (162aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_4
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(2097..2342)
DNA (246bp) protein (82aa)
BolA-like protein Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UPV8_9LEPT
BolA-like protein {ECO:0000313|EMBL:EPG67195.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
putative BolA-like protein
S_p1_S3_coassembly_k141_1401917_5
AR9, Woesearchaeaota, DPANN, Archaea

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2544..2861
DNA (318bp) protein (106aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl7ae; 50S ribosomal protein L7
Tax=AR9
S_p1_S3_coassembly_k141_1401917_6
AR9, Woesearchaeaota, DPANN, Archaea

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2875..3183
DNA (309bp) protein (103aa)
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S28e
Tax=AR9
S_p1_S3_coassembly_k141_1401917_7
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

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3403..3897
DNA (495bp) protein (165aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nucleoside-diphosphate kinase (EC:2.7.4.6)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
S_p1_S3_coassembly_k141_1401917_8

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3940..6138
DNA (2199bp) protein (733aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Elongation factor 2
S_p1_S3_coassembly_k141_1401917_9
unknown

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6139..6921
DNA (783bp) protein (261aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_10
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(6918..7178)
DNA (261bp) protein (87aa)
hypothetical protein; K09005 hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1401917_11

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comp(7266..7715)
DNA (450bp) protein (150aa)
PUA domain containing protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSW6_METIM
Uncharacterized protein {ECO:0000313|EMBL:KHO52004.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
PUA domain containing protein
S_p1_S3_coassembly_k141_1401917_12
unknown

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comp(7728..8123)
DNA (396bp) protein (132aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(8120..8653)
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1401917_14
GWB1_OD1_37_5, Nomurabacteria, Parcubacteria, Bacteria

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8907..9302
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35381.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_37_5.;"
cytochrome bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
S_p1_S3_coassembly_k141_1401917_15
unknown

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9361..10176
DNA (816bp) protein (272aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_16
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(10197..13013)
DNA (2817bp) protein (939aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
LeuS protein {ECO:0000313|EMBL:AIZ56417.1}; EC=6.1.1.4 {ECO:0000313|EMBL:AIZ56417.1};; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036806A0
S_p1_S3_coassembly_k141_1401917_17
unknown

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comp(13209..14651)
DNA (1443bp) protein (481aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_18
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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14736..16445
DNA (1710bp) protein (570aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760ED3
PHP domain-containing protein
Tax=CG_Wolfe_01
S_p1_S3_coassembly_k141_1401917_19
unknown

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16531..16812
DNA (282bp) protein (94aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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17121..17462
DNA (342bp) protein (114aa)
hypothetical protein
id=5102994 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_1401917_21
unknown

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17893..18651
DNA (759bp) protein (253aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1401917_22
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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18841..19215
DNA (375bp) protein (125aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
S_p1_S3_coassembly_k141_1401917_23
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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19217..19909
DNA (693bp) protein (231aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
B3/4 domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
S_p1_S3_coassembly_k141_1401917_24
GWF2_OD1_38_76, Parcubacteria, Bacteria

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comp(19962..20933)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=uncultured bacterium (gcode 4) RepID=K2F527_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ81259.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
D-3-phosphoglycerate dehydrogenase
Displaying 24 items

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