ggKbase home page

S_p1_S3_coassembly_k141_1982263

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1982263_1
GWA1_OP11_41_11_plus, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(169..402)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR87890.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_41_11.;"
S_p1_S3_coassembly_k141_1982263_2
unknown

Not on your lists

comp(399..992)
DNA (594bp) protein (198aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_3
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


1136..1702
DNA (567bp) protein (189aa)
DNA-directed RNA polymerase subunit E Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase subunit E
S_p1_S3_coassembly_k141_1982263_4

Not on your lists

1705..1893
DNA (189bp) protein (63aa)
rpoE2; DNA-directed RNA polymerase subunit E'; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO45208.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO45208.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA-directed RNA polymerase, subunit E'' (EC:2.7.7.6)
S_p1_S3_coassembly_k141_1982263_5
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

1904..2203
DNA (300bp) protein (100aa)
30S ribosomal protein S24e Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
S_p1_S3_coassembly_k141_1982263_6

Not on your lists

2204..2431
DNA (228bp) protein (76aa)
30S ribosomal protein S27; K02977 small subunit ribosomal protein S27Ae bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; species="Archaea.;" source="archaeon GW2011_AR3.;"
rps27ae; 30S ribosomal protein S27ae
S_p1_S3_coassembly_k141_1982263_7
unknown

Not on your lists

2480..3349
DNA (870bp) protein (290aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_8
unknown

Not on your lists

3358..4305
DNA (948bp) protein (316aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4541..5668)
DNA (1128bp) protein (376aa)
Cell division protein FtsZ bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
Tax=AR15
S_p1_S3_coassembly_k141_1982263_10
unknown

Not on your lists

comp(5760..6005)
DNA (246bp) protein (82aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_11

Not on your lists

comp(6029..6709)
DNA (681bp) protein (227aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_1982263_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6837..7487)
DNA (651bp) protein (217aa)
Tax=CG_Pacearch_06
S_p1_S3_coassembly_k141_1982263_13
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7517..8047)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EZB6_9BACT
cytidylate kinase
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
S_p1_S3_coassembly_k141_1982263_14
unknown

Not on your lists

8185..8811
DNA (627bp) protein (209aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_15
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(8812..9504)
DNA (693bp) protein (231aa)
Glycosyl transferase family 2 Tax=Pedosphaera parvula Ellin514 RepID=B9XH86_9BACT
probable glycosyl transferase
Tax=GWA2_WOR_2_47_8_curated
S_p1_S3_coassembly_k141_1982263_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9574..10656)
DNA (1083bp) protein (361aa)
id=5041678 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S_p1_S3_coassembly_k141_1982263_17
unknown

Not on your lists

10789..11064
DNA (276bp) protein (92aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1982263_18
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

11078..11860
DNA (783bp) protein (261aa)
Tax=AR13
S_p1_S3_coassembly_k141_1982263_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


12088..12825
DNA (738bp) protein (246aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L11
Tax=AR9
S_p1_S3_coassembly_k141_1982263_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13037..13327)
DNA (291bp) protein (97aa)
Tax=AR9
S_p1_S3_coassembly_k141_1982263_21
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13462..14190
DNA (729bp) protein (243aa)
Methylase Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JHS6_9GAMM
Methylase {ECO:0000313|EMBL:EKE82936.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
SAM-dependent methyltransferase HemK-related protein
S_p1_S3_coassembly_k141_1982263_22
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(14282..16951)
DNA (2670bp) protein (890aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S8G0_METSF
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:KKQ65017.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
S_p1_S3_coassembly_k141_1982263_23

Not on your lists

comp(17045..19363)
DNA (2319bp) protein (773aa)
AAA family ATPase, CDC48 subfamily bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AJF61321.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
AAA family ATPase, CDC48 subfamily
S_p1_S3_coassembly_k141_1982263_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19467..19895)
DNA (429bp) protein (143aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR9
S_p1_S3_coassembly_k141_1982263_25
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20225..20797
DNA (573bp) protein (191aa)
hypothetical protein Tax=Loktanella vestfoldensis RepID=UPI0003621CCA
adenylate cyclase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S_p1_S3_coassembly_k141_1982263_26
unknown

Not on your lists

comp(20852..21121)
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 26 items

View Taxonomy