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S_p1_S3_coassembly_k141_220402

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_220402_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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369..2519
DNA (2151bp) protein (717aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9Q9B8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX57944.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
S_p1_S3_coassembly_k141_220402_2
AR10, Diapherotrites, DPANN, Archaea

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2491..4323
DNA (1833bp) protein (611aa)
hypothetical protein
transmembrane_regions bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_220402_3
unknown

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4320..5501
DNA (1182bp) protein (394aa)

This feature has no annotations

S_p1_S3_coassembly_k141_220402_4

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5498..6232
DNA (735bp) protein (245aa)
putative circadian clock protein KaiC (EC:2.7.11.1) bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF60491.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_220402_5
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6275..6661)
DNA (387bp) protein (129aa)
id=5048285 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
PilT domain-containing protein
Tax=AR18
S_p1_S3_coassembly_k141_220402_6
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6663..6869)
DNA (207bp) protein (69aa)
id=5048284 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_220402_7
unknown

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6978..8738
DNA (1761bp) protein (587aa)

This feature has no annotations

S_p1_S3_coassembly_k141_220402_8

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8863..10131
DNA (1269bp) protein (423aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_220402_9

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10269..10577
DNA (309bp) protein (103aa)
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_220402_10
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

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10640..11140
DNA (501bp) protein (167aa)
Putative vancomycin resistance protein Tax=Bhargavaea cecembensis DSE10 RepID=M7ND78_9BACL
Putative vancomycin resistance protein {ECO:0000313|EMBL:EMR05202.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
hypothetical protein
S_p1_S3_coassembly_k141_220402_11

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11263..11697
DNA (435bp) protein (145aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60336.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_220402_12
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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11709..13178
DNA (1470bp) protein (490aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_220402_13
unknown

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13194..13382
DNA (189bp) protein (63aa)

This feature has no annotations

S_p1_S3_coassembly_k141_220402_14
unknown

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comp(13292..13555)
DNA (264bp) protein (88aa)

This feature has no annotations

S_p1_S3_coassembly_k141_220402_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13557..13979)
DNA (423bp) protein (141aa)
Signal peptidase I {ECO:0000313|EMBL:EEQ56978.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EEQ56978.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Signal peptidase I Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEC5_9FIRM
putative phage repressor
S_p1_S3_coassembly_k141_220402_16
unknown

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comp(14111..14656)
DNA (546bp) protein (182aa)

This feature has no annotations

Displaying 16 items

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