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S_p1_S3_coassembly_k141_990160

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_990160_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(33..308)
DNA (276bp) protein (92aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=PHS_ROSCS
transcriptional coactivator/pterin dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
S_p1_S3_coassembly_k141_990160_2
unknown

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comp(536..838)
DNA (303bp) protein (101aa)

This feature has no annotations

S_p1_S3_coassembly_k141_990160_3

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comp(910..1611)
DNA (702bp) protein (234aa)
UPI0003D1B02C related cluster Tax=unknown RepID=UPI0003D1B02C
Uncharacterized protein {ECO:0000313|EMBL:KKM84943.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
threonyl/alanyl tRNA synthetase SAD
S_p1_S3_coassembly_k141_990160_4

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comp(1640..2122)
DNA (483bp) protein (161aa)
id=5048453 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45487.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p1_S3_coassembly_k141_990160_5

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2198..3565
DNA (1368bp) protein (456aa)
pgm; phosphoglucomutase (pgm) (EC:5.4.2.2); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphoglucomutase (Pgm), phosphomannomutase / phosphoglucomutase {ECO:0000313|EMBL:KHO45341.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KHO45341.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45341.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
phosphoglucosamine mutase (EC:5.4.2.10)
S_p1_S3_coassembly_k141_990160_6
unknown

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4118..4606
DNA (489bp) protein (163aa)

This feature has no annotations

S_p1_S3_coassembly_k141_990160_7

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4639..5925
DNA (1287bp) protein (429aa)
MiaB-like tRNA modifying enzyme bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:AJF61863.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA modification enzyme, miab family
S_p1_S3_coassembly_k141_990160_8
unknown

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5930..6391
DNA (462bp) protein (154aa)

This feature has no annotations

S_p1_S3_coassembly_k141_990160_9
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(6400..6942)
DNA (543bp) protein (181aa)
alias=gwa2_scaffold_521_195 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
thioredoxin protein
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_990160_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6947..7291)
DNA (345bp) protein (115aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_990160_11

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7386..8576
DNA (1191bp) protein (397aa)
Putative queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative queuine tRNA-ribosyltransferase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BB25_9EURY
tRNA-guanine transglycosylase
S_p1_S3_coassembly_k141_990160_12
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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8609..9274
DNA (666bp) protein (222aa)
RNA polymerase, sigma 70 subunit, RpoD family Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QYA2_CHLT3
RpoD family RNA polymerase sigma 70 subunit
RNA polymerase, sigma 70 subunit, RpoD family {ECO:0000313|EMBL:ACF15068.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
S_p1_S3_coassembly_k141_990160_13
unknown

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comp(9322..9426)
DNA (105bp) protein (35aa)

This feature has no annotations

S_p1_S3_coassembly_k141_990160_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9433..9732)
DNA (300bp) protein (100aa)
Transcriptional regulator PadR family protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcriptional regulator PadR family transcriptional regulator
Tax=RBG_13_Bathyarchaeota_38_9_curated
Displaying 14 items

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