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S_p1_S3_coassembly_k141_525428

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_525428_1

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1..1749
DNA (1749bp) protein (583aa)
Marine sediment metagenome DNA, contig: S01H4_L01337 {ECO:0000313|EMBL:GAG53980.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_525428_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1872..2297
DNA (426bp) protein (142aa)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_525428_3
AR5, Aenigmarchaeota, DPANN, Archaea

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2351..2968
DNA (618bp) protein (206aa)
Putative uncharacterized protein (Fragment) bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR5
S_p1_S3_coassembly_k141_525428_4

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2965..3414
DNA (450bp) protein (150aa)
Marine sediment metagenome DNA, contig: S01H1_L02231 {ECO:0000313|EMBL:GAF72315.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_525428_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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3416..5149
DNA (1734bp) protein (578aa)
type II secretion system protein E bin=Nanosalina tax=Nanosalina
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_525428_6
AR5, Aenigmarchaeota, DPANN, Archaea

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5212..6060
DNA (849bp) protein (283aa)
hypothetical protein; K07333 archaeal flagellar protein FlaJ bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
S_p1_S3_coassembly_k141_525428_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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6062..6991
DNA (930bp) protein (310aa)
gsp-4; putative type II secretion system protein; K07333 archaeal flagellar protein FlaJ bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_525428_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(7108..7530)
DNA (423bp) protein (141aa)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_525428_9
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7677..8273
DNA (597bp) protein (199aa)
Phosphatidate cytidylyltransferase Tax=Azospirillum sp. CAG:260 RepID=R6HS54_9PROT
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:CDB40703.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
phosphatidate cytidylyltransferase
S_p1_S3_coassembly_k141_525428_trna_1
unknown

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8323..8396
DNA (74bp)
transferRNA Arg
S_p1_S3_coassembly_k141_525428_trna_2
unknown

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8446..8591
DNA (146bp)
transferRNA Pro
S_p1_S3_coassembly_k141_525428_10

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comp(8600..10186)
DNA (1587bp) protein (529aa)
lysS; lysine--tRNA ligase (EC:6.1.1.6) bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea.;" source="archaeon GW2011_AR5.;"
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
S_p1_S3_coassembly_k141_525428_11
unknown

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10224..10439
DNA (216bp) protein (72aa)

This feature has no annotations

S_p1_S3_coassembly_k141_525428_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(10444..11001)
DNA (558bp) protein (186aa)
Chromosome segregation and condensation protein ScpB Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYL5_METCG
scpB; chromosome segregation and condensation protein ScpB
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_525428_13

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comp(10979..11719)
DNA (741bp) protein (247aa)
condensin subunit ScpA; K05896 segregation and condensation protein A bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Segregation and condensation protein A {ECO:0000313|EMBL:KHO47998.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
Chromosome segregation and condensation protein ScpA
S_p1_S3_coassembly_k141_525428_14
unknown

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comp(11798..12085)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p1_S3_coassembly_k141_525428_15

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12152..12547
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S01H4_S22331 {ECO:0000313|EMBL:GAH07788.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_525428_16

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12629..13183
DNA (555bp) protein (185aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; species="Archaea.;" source="archaeon GW2011_AR5.;"
metal-dependent phosphohydrolase
S_p1_S3_coassembly_k141_525428_17
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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13206..13841
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGV4_METP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN37483.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
S_p1_S3_coassembly_k141_525428_18
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(13846..14826)
DNA (981bp) protein (327aa)
tRNA-modifying enzyme bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA-modifying protein
Tax=AR5
S_p1_S3_coassembly_k141_525428_19
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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14859..15506
DNA (648bp) protein (216aa)
Methyltransferase type 11 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8S5_AMMDK
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACX52704.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
S_p1_S3_coassembly_k141_525428_20
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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15567..16640
DNA (1074bp) protein (358aa)
nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F01_METBF
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_525428_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16642..17196)
DNA (555bp) protein (185aa)
phosphohydrolase
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
S_p1_S3_coassembly_k141_525428_22
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(17221..18036)
DNA (816bp) protein (272aa)
hypothetical protein; K07055 tRNA wybutosine-synthesizing protein 2 [EC:2.1.1.-] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
methyltransferase (EC:2.1.1.-)
Tax=AR5
S_p1_S3_coassembly_k141_525428_23
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(18060..18563)
DNA (504bp) protein (168aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_525428_24
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(18736..19011)
DNA (276bp) protein (92aa)
DNA-binding protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA-binding protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_525428_25
AR11, Woesearchaeaota, DPANN, Archaea

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comp(19008..20267)
DNA (1260bp) protein (420aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S_p1_S3_coassembly_k141_525428_26
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(20270..20683)
DNA (414bp) protein (138aa)
30S ribosomal protein S19e Tax=Thermococcus sp. AM4 RepID=B7R4T3_9EURY
30S ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
S_p1_S3_coassembly_k141_525428_27
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(20740..21069)
DNA (330bp) protein (110aa)
Ribonuclease P protein component 4 {ECO:0000255|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000255|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000255|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000255|HAMAP-Rule:MF_00757}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 /; JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium; thermoautotrophicum).;"
Ribonuclease P protein component 4 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RNP4_METTH
hypothetical protein
S_p1_S3_coassembly_k141_525428_28
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(21105..22049)
DNA (945bp) protein (315aa)
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
Displaying items 1-30 of 32 in total

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