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S_p1_S3_coassembly_k141_590673

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_590673_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

S_p1_S3_coassembly_k141_590673_trna_1
unknown

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comp(17..156)
DNA (140bp)
transferRNA Leu
S_p1_S3_coassembly_k141_590673_2

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comp(235..744)
DNA (510bp) protein (170aa)
Marine sediment metagenome DNA, contig: S01H1_S08208 {ECO:0000313|EMBL:GAG06249.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_590673_3

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comp(754..981)
DNA (228bp) protein (76aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_590673_4
unknown

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comp(994..1530)
DNA (537bp) protein (179aa)
hypothetical protein
S_p1_S3_coassembly_k141_590673_5

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1674..3887
DNA (2214bp) protein (738aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372F63A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62571.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_590673_6
AR11, Woesearchaeaota, DPANN, Archaea

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3994..4581
DNA (588bp) protein (196aa)
id=5800168 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
S_p1_S3_coassembly_k141_590673_7

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4583..5215
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S12H4_L02343 {ECO:0000313|EMBL:GAI83156.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
condensin subunit ScpB; K06024 segregation and condensation protein B bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
S_p1_S3_coassembly_k141_590673_8
unknown

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5166..5303
DNA (138bp) protein (46aa)

This feature has no annotations

S_p1_S3_coassembly_k141_590673_9
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5265..6350)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GE18_9DELT
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
S_p1_S3_coassembly_k141_590673_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


6686..9163
DNA (2478bp) protein (826aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S_p1_S3_coassembly_k141_590673_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9160..10278
DNA (1119bp) protein (373aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rlmL; 23S rRNA m(2)G2445 methyltransferase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_590673_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10507..11244
DNA (738bp) protein (246aa)
Peptidase M50 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_590673_13
GWF2_OD1_38_8, Parcubacteria, Bacteria

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11269..11622
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ86409.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
S_p1_S3_coassembly_k141_590673_14
unknown

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11626..11940
DNA (315bp) protein (105aa)

This feature has no annotations

S_p1_S3_coassembly_k141_590673_15

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12062..12727
DNA (666bp) protein (222aa)
hypothetical protein bin=AR5_curated_draft species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48441.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
S_p1_S3_coassembly_k141_590673_16

Not on your lists

comp(12824..13714)
DNA (891bp) protein (297aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea.;" source="archaeon GW2011_AR9.;"
Protease HtpX homolog Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ57_RUBXD bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease HtpX-like protein
S_p1_S3_coassembly_k141_590673_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13717..14262)
DNA (546bp) protein (182aa)
LemA family protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D774_METSW
LemA family protein
Tax=AR9
S_p1_S3_coassembly_k141_590673_18
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14323..14811)
DNA (489bp) protein (163aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Megasphaera sp. BV3C16-1 RepID=U7UJW2_9FIRM
S_p1_S3_coassembly_k141_590673_19
unknown

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comp(14815..15189)
DNA (375bp) protein (125aa)

This feature has no annotations

S_p1_S3_coassembly_k141_590673_20
unknown

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comp(15250..15624)
DNA (375bp) protein (125aa)

This feature has no annotations

S_p1_S3_coassembly_k141_590673_21
CG_Micra_04, Micraarchaeota, Archaea

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15733..16446
DNA (714bp) protein (238aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
transcriptional regulator TrmB
Tax=CG_Micra_04
S_p1_S3_coassembly_k141_590673_22
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16492..17709)
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BYE6_9BACT
putative uncharacterized protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
S_p1_S3_coassembly_k141_590673_23
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

17765..17890
DNA (126bp) protein (42aa)
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR9
Displaying 24 items

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