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S_p1_S3_coassembly_k141_250497

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_250497_1
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..759
DNA (759bp) protein (253aa)
Putative NAD-dependent malic enzyme 4 {ECO:0000313|EMBL:CEE02287.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CEE02287.1};; Strain B4064 NODE_163, whole genome shotgun sequence {ECO:0000313|EMBL:KIO62646.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIO62646.1};; Strain B4166 NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIO69219.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIO69219.1};; Strain B4167 NODE_397, whole genome shotgun sequence {ECO:0000313|EMBL:KIO70059.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIO70059.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
Malic enzyme Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWW5_CLOCD
malic enzyme
S_p1_S3_coassembly_k141_250497_2
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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813..1565
DNA (753bp) protein (251aa)
UPI0003D1AA9B related cluster Tax=unknown RepID=UPI0003D1AA9B
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
S_p1_S3_coassembly_k141_250497_3

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comp(1507..1803)
DNA (297bp) protein (99aa)
Transcriptional regulator, PadR family (Fragment) Tax=mine drainage metagenome RepID=T1CGR7_9ZZZZ
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EQD66315.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator PadR family transcriptional regulator
S_p1_S3_coassembly_k141_250497_4
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1902..2168
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKK9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62254.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
S_p1_S3_coassembly_k141_250497_5
AR5, Aenigmarchaeota, DPANN, Archaea

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2234..2803
DNA (570bp) protein (190aa)
flavin reductase domain-containing protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR5
S_p1_S3_coassembly_k141_250497_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2829..4283
DNA (1455bp) protein (485aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEX6_9FIRM
S_p1_S3_coassembly_k141_250497_7
R_WWE3_40_23, WWE3, Bacteria

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4309..4788
DNA (480bp) protein (160aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000373B3F4
NUDIX hydrolase
Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
S_p1_S3_coassembly_k141_250497_8
GWF2_WS6_complete_39_15, WS6, Bacteria

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comp(5164..6324)
DNA (1161bp) protein (387aa)
Uncharacterized protein bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
Uncharacterized protein {ECO:0000313|EMBL:KKR06457.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
S_p1_S3_coassembly_k141_250497_9
unknown

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comp(6343..6795)
DNA (453bp) protein (151aa)

This feature has no annotations

S_p1_S3_coassembly_k141_250497_10
CG_Micra_06, Micraarchaeota, Archaea

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6845..8449
DNA (1605bp) protein (535aa)
lysS; lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5C1_UNCMA
Tax=CG_Micra_06
S_p1_S3_coassembly_k141_250497_11
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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8496..9635
DNA (1140bp) protein (380aa)
Conserved protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
membrane-associated metalloprotease
Membrane-associated metalloprotease, M50 family, containing PDZ domain {ECO:0000313|EMBL:BAD86009.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;"
Displaying 11 items

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