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S_p1_S3_coassembly_k141_476191

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_476191_1

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3..233
DNA (231bp) protein (77aa)
30S ribosomal protein S13 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_476191_2

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294..773
DNA (480bp) protein (160aa)
30S ribosomal protein S4 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; species="Archaea.;" source="archaeon GW2011_AR5.;"
30S ribosomal protein S4
S_p1_S3_coassembly_k141_476191_3
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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775..1161
DNA (387bp) protein (129aa)
30S ribosomal protein S11 Tax=Thermococcus zilligii RepID=UPI000299D2B8
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
S_p1_S3_coassembly_k141_476191_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1181..1810
DNA (630bp) protein (210aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_476191_5
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2131..2484
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Methanobacterium sp. MB1 RepID=U6EAM9_9EURY
hypothetical protein
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
S_p1_S3_coassembly_k141_476191_6
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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2481..2906
DNA (426bp) protein (142aa)
50S ribosomal protein L13 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL13_ARCFU
rpl13P; 50S ribosomal protein L13P
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM; 9628 / NBRC 100126).;"
S_p1_S3_coassembly_k141_476191_7
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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2907..3314
DNA (408bp) protein (136aa)
30S ribosomal protein S9 Tax=Methanocaldococcus RepID=RS9_METJA
30S ribosomal protein S9
30S ribosomal protein S9; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
S_p1_S3_coassembly_k141_476191_8
unknown

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3322..3567
DNA (246bp) protein (82aa)

This feature has no annotations

S_p1_S3_coassembly_k141_476191_9
AR6, Pacearchaeaota, DPANN, Archaea

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3564..3758
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A0E3_FERFK
RNA polymerase, N/8 Kd subunits
Tax=AR6
S_p1_S3_coassembly_k141_476191_10
unknown

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3803..5203
DNA (1401bp) protein (467aa)

This feature has no annotations

S_p1_S3_coassembly_k141_476191_11
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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5586..6842
DNA (1257bp) protein (419aa)
Integrase family protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W9_FERPA
integrase
Integrase family protein {ECO:0000313|EMBL:ADC64602.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
Displaying 11 items

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