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S_p1_S3_coassembly_k141_604365

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_604365_1
R_SM2F11_48_13, SM2F11, Bacteria

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3..563
DNA (561bp) protein (187aa)
cytochrome c biogenesis transmembrane protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
S_p1_S3_coassembly_k141_604365_2
R_WWE3_40_23, WWE3, Bacteria

Not on your lists

547..1113
DNA (567bp) protein (189aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Uncharacterized protein Tax=Coprobacillus sp. CAG:826 RepID=R7DQE2_9FIRM
Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
S_p1_S3_coassembly_k141_604365_3
unknown

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1110..1337
DNA (228bp) protein (76aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_4
unknown

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comp(1302..1562)
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_5
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1580..1891)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G0L6_9DELT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_604365_6

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comp(1888..2493)
DNA (606bp) protein (202aa)
Mn2+dependent serine/threonine protein kinase bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39823.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Kae1-associated kinase Bud32
S_p1_S3_coassembly_k141_604365_7
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2583..3110
DNA (528bp) protein (176aa)
AsnC family transcriptional regulator Tax=Thermococcus zilligii RepID=UPI00029A382E
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADT83242.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
S_p1_S3_coassembly_k141_604365_8
unknown

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comp(3103..3546)
DNA (444bp) protein (148aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_9
unknown

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3859..4014
DNA (156bp) protein (52aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_10
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(3991..5001)
DNA (1011bp) protein (337aa)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7C5_METSL
YgjD/Kae1/Qri7 family, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_604365_11
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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comp(5376..6692)
DNA (1317bp) protein (439aa)
Phosphoribosylamine/glycine ligase bin=PER_GWC2_41_7 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S_p1_S3_coassembly_k141_604365_12
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

comp(6800..8758)
DNA (1959bp) protein (653aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Tax=GWE1_Berkelbacteria_39_12
S_p1_S3_coassembly_k141_604365_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(8793..8981)
DNA (189bp) protein (63aa)
30S ribosomal protein S27ae Tax=Candidatus Nitrososphaera gargensis RepID=K0INM2_NITGG
rps27ae; 30S ribosomal protein S27ae
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_604365_14
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(8987..9418)
DNA (432bp) protein (144aa)
50S ribosomal protein L31e Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL31_METJA
50S ribosomal protein L31e
50S ribosomal protein L31e; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
S_p1_S3_coassembly_k141_604365_15
unknown

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comp(9422..9595)
DNA (174bp) protein (58aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(9597..9854)
DNA (258bp) protein (86aa)
DNA-binding protein Mhar_1733 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQU8_METH6
hypothetical protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_604365_17
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(9855..10274)
DNA (420bp) protein (140aa)
30S ribosomal protein S19e Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS19E_PYRHO
30S ribosomal protein S19
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
S_p1_S3_coassembly_k141_604365_18
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10353..10661)
DNA (309bp) protein (103aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|HAMAP-Rule:MF_00757}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
Ribonuclease P protein component 4 Tax=Methanobrevibacter sp. AbM4 RepID=R9SI21_9EURY
ribonuclease P subunit RPR2
S_p1_S3_coassembly_k141_604365_19
unknown

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comp(10703..11140)
DNA (438bp) protein (146aa)

This feature has no annotations

S_p1_S3_coassembly_k141_604365_20

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comp(11297..12064)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2G5L1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE18480.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glycerophosphodiester phosphodiesterase
S_p1_S3_coassembly_k141_604365_21
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

comp(12409..12732)
DNA (324bp) protein (108aa)
ADP-ribose pyrophosphatase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
NUDIX family hydrolase
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
Displaying 21 items

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