ggKbase home page

S_p1_S3_coassembly_k141_1362688

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1362688_1
unknown

Not on your lists

2..223
DNA (222bp) protein (74aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1362688_2
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(220..1155)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719B2F
NAD-dependent epimerase/dehydratase family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
S_p1_S3_coassembly_k141_1362688_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1152..1922)
DNA (771bp) protein (257aa)
putative UDP-glucose/GDP-mannose dehydrogenase (EC:1.1.1.22)
Putative UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:AIC16651.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AIC16651.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
TrkA-N domain-containing protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5Z3_9ARCH
S_p1_S3_coassembly_k141_1362688_4

Not on your lists

2355..2996
DNA (642bp) protein (214aa)
TM helix repeat-containing protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
TM helix repeat-containing protein {ECO:0000313|EMBL:KHO47627.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
S_p1_S3_coassembly_k141_1362688_5
RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3088..4656
DNA (1569bp) protein (523aa)
Uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYC2_FULL_OD1_Yanofskybacteria_44_13_curated
S_p1_S3_coassembly_k141_1362688_6
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(4658..5797)
DNA (1140bp) protein (380aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
truD; putative tRNA pseudouridine synthase D (EC:5.4.99.27)
Probable tRNA pseudouridine synthase D Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGG9_9EURY
S_p1_S3_coassembly_k141_1362688_7
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(5832..6176)
DNA (345bp) protein (115aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00628};; species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Peptidyl-tRNA hydrolase Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PTH_METKA
S_p1_S3_coassembly_k141_1362688_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(6209..7051)
DNA (843bp) protein (281aa)
Putative membrane protein Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TVM8_9EURY
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1362688_9
unknown

Not on your lists

comp(7057..7608)
DNA (552bp) protein (184aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1362688_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7642..8178)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Haloarcula hispanica RepID=V5TJV0_HALHI
CDP-diglyceride synthetase
UPF0290 protein HAH_0338 {ECO:0000256|HAMAP-Rule:MF_01117}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC; 102182 / NCIMB 2187 / VKM B-1755).;"
Displaying 10 items

View Taxonomy