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S_p1_S3_coassembly_k141_702567

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_702567_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(151..534)
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PM40_9ZZZZ
PilT protein domain-containing protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_702567_2
unknown

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comp(531..1664)
DNA (1134bp) protein (378aa)

This feature has no annotations

S_p1_S3_coassembly_k141_702567_3

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1766..2353
DNA (588bp) protein (196aa)
DNA-directed RNA polymerase {ECO:0000313|EMBL:EFK95395.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EFK95395.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
DNA-directed RNA polymerase Tax=sediment metagenome RepID=D9PM39_9ZZZZ
DNA-directed RNA polymerase subunit E
S_p1_S3_coassembly_k141_702567_4

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2372..2557
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase, RpoE2, archaeal Tax=sediment metagenome RepID=D9PM38_9ZZZZ
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase, subunit E
S_p1_S3_coassembly_k141_702567_5

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2557..2853
DNA (297bp) protein (99aa)
30S ribosomal protein S24e Tax=sediment metagenome RepID=D9PM37_9ZZZZ
30S ribosomal protein S24e {ECO:0000313|EMBL:EFK95393.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ribosomal protein S24e
S_p1_S3_coassembly_k141_702567_6
unknown

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2889..3005
DNA (117bp) protein (39aa)

This feature has no annotations

S_p1_S3_coassembly_k141_702567_7
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3143..3757
DNA (615bp) protein (205aa)
HAD superfamily hydrolase Tax=Rhodopirellula sp. SWK7 RepID=M5TKF5_9PLAN
HAD superfamily hydrolase {ECO:0000313|EMBL:EMI46041.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
haloacid dehalogenase superfamily protein
S_p1_S3_coassembly_k141_702567_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3823..4683)
DNA (861bp) protein (287aa)
Uncharacterized protein (Fragment) Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO11849.1}; Flags: Fragment;; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
hypothetical protein
S_p1_S3_coassembly_k141_702567_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4840..5148)
DNA (309bp) protein (103aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12
Tax=AR11
S_p1_S3_coassembly_k141_702567_10
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5176..6039)
DNA (864bp) protein (288aa)
50S ribosomal protein L10 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rplP0; acidic ribosomal protein P0
S_p1_S3_coassembly_k141_702567_11

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comp(6036..6749)
DNA (714bp) protein (238aa)
50S ribosomal protein L1 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L1 {ECO:0000313|EMBL:AJF61778.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L1
Displaying 11 items

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