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S_p1_S3_coassembly_k141_2282295

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2282295_1

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198..485
DNA (288bp) protein (96aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
Nucleic acid binding OB-fold tRNA/helicase-type bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
nucleic acid binding OB-fold tRNA/helicase-type
S_p1_S3_coassembly_k141_2282295_2
unknown

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comp(478..717)
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282295_trna_1
unknown

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773..846
DNA (74bp)
transferRNA Phe
S_p1_S3_coassembly_k141_2282295_3
unknown

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944..1876
DNA (933bp) protein (311aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282295_4
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1951..3036
DNA (1086bp) protein (362aa)
dys1; deoxyhypusine synthase (EC:2.5.1.46)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JBF6_9DELT
Tax=RBG_13_Deltaproteobacteria_49_15_curated
S_p1_S3_coassembly_k141_2282295_5
PER_GWF2_38_29, Peregrinibacteria, Bacteria

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comp(2989..3513)
DNA (525bp) protein (175aa)
phosphoesterase PA-phosphatase-like protein bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:KKQ67662.1}; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
phosphoesterase PA-phosphatase related protein
S_p1_S3_coassembly_k141_2282295_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3510..5636)
DNA (2127bp) protein (709aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_2282295_7
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(5633..7933)
DNA (2301bp) protein (767aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_2282295_8
AR11, Woesearchaeaota, DPANN, Archaea

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8076..8522
DNA (447bp) protein (149aa)
Tax=AR11
S_p1_S3_coassembly_k141_2282295_9
AR11, Woesearchaeaota, DPANN, Archaea

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8562..9203
DNA (642bp) protein (214aa)
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S_p1_S3_coassembly_k141_2282295_10

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comp(9200..9775)
DNA (576bp) protein (192aa)
transmembrane_regions bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46744.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_2282295_11
AR15, Woesearchaeaota, DPANN, Archaea

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comp(9779..10330)
DNA (552bp) protein (184aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p1_S3_coassembly_k141_2282295_12

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comp(10385..10969)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50645.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
S_p1_S3_coassembly_k141_2282295_13
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10966..11565)
DNA (600bp) protein (200aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_2282295_14
unknown

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11621..13258
DNA (1638bp) protein (546aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282295_15
CG_Woesearch_02, Woesearchaeota, Archaea

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13298..13873
DNA (576bp) protein (192aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
haloacid dehalogenase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_2282295_16
CG_PER_03, Peregrinibacteria, Bacteria

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13890..14423
DNA (534bp) protein (178aa)
intracellular protease, PfpI family
ThiJ/PfpI domain-containing protein bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=CG_PER_03
S_p1_S3_coassembly_k141_2282295_17
unknown

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14491..14796
DNA (306bp) protein (102aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282295_18

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14944..15252
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX62_FERPA
CopG family transcriptional regulator {ECO:0000313|EMBL:KHO48968.1}; species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
S_p1_S3_coassembly_k141_2282295_19

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15249..15752
DNA (504bp) protein (168aa)
Nucleic acid-binding protein Tax=Halococcus morrhuae DSM 1307 RepID=M0M9W0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:KKM64329.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative nucleic acid-binding protein, contains PIN domain
S_p1_S3_coassembly_k141_2282295_20
AR18, Woesearchaeaota, DPANN, Archaea

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16366..18144
DNA (1779bp) protein (593aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Tax=AR18
S_p1_S3_coassembly_k141_2282295_21

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18149..18754
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHO49675.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
putative methyltransferase
S_p1_S3_coassembly_k141_2282295_22

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18780..19064
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Archaea.;" source="archaeon GW2011_AR21.;"
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_2282295_23

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19061..20497
DNA (1437bp) protein (479aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO55627.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO55627.1};; Flags: Fragment;; species="Archaea.;" source="archaeon GW2011_AR21.;"
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p1_S3_coassembly_k141_2282295_24
AR4, Woesearchaeaota, DPANN, Archaea

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20484..21854
DNA (1371bp) protein (457aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Tax=AR4
S_p1_S3_coassembly_k141_2282295_25
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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21955..22563
DNA (609bp) protein (203aa)
Cell wall hydrolyses involved in spore germination Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCY4_DESAR
cell wall hydrolyses involved in spore germination
Cell wall hydrolyses involved in spore germination {ECO:0000313|EMBL:AEB09558.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
S_p1_S3_coassembly_k141_2282295_26
unknown

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comp(22574..23008)
DNA (435bp) protein (145aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282295_27
unknown

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comp(22948..23079)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 28 items

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