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S_p1_S3_coassembly_k141_809674

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_809674_1
CG_Micra_05, Micraarchaeota, Archaea

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comp(138..1415)
DNA (1278bp) protein (426aa)
Putative ATPase (AAA+ superfamily) Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HD25_METFS
putative ATPase (AAA+ superfamily)
Tax=CG_Micra_05
S_p1_S3_coassembly_k141_809674_2
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1518..2474)
DNA (957bp) protein (319aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
Ornithine carbamoyltransferase Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI43_PYRYC
ornithine carbamoyltransferase
S_p1_S3_coassembly_k141_809674_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2501..2815)
DNA (315bp) protein (105aa)
Ferredoxin family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sucraseferredoxin family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p1_S3_coassembly_k141_809674_4
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(2826..3725)
DNA (900bp) protein (300aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=uncultured candidate division OP1 bacterium RepID=H5SQL2_9BACT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
S_p1_S3_coassembly_k141_809674_5
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3764..4729
DNA (966bp) protein (322aa)
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Idiomarina sp. A28L RepID=F7RXN2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN51175.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
diguanylate cyclase
S_p1_S3_coassembly_k141_809674_6

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comp(4730..6046)
DNA (1317bp) protein (439aa)
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_809674_7
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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6093..6806
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Methanobacterium sp. MB1 RepID=U6EAU6_9EURY
putative protein MJ0570
Uncharacterized protein {ECO:0000313|EMBL:CEA14408.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
S_p1_S3_coassembly_k141_809674_8
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6803..7384
DNA (582bp) protein (194aa)
Glutamine amidotransferase class-I Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZE4_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW61579.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
S_p1_S3_coassembly_k141_809674_9
unknown

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comp(7397..8392)
DNA (996bp) protein (332aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_10
unknown

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comp(8389..8631)
DNA (243bp) protein (81aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_11

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comp(8634..10493)
DNA (1860bp) protein (620aa)
DNA ligase 1 (EC:6.5.1.1)
DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_809674_12
CG_Pacearch_05, Pacearchaeota, Archaea

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10702..12144
DNA (1443bp) protein (481aa)
prolyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AB39E
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_809674_trna_1
unknown

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12174..12247
DNA (74bp)
transferRNA Pro
S_p1_S3_coassembly_k141_809674_13
unknown

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comp(12435..12962)
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_14

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comp(13022..13495)
DNA (474bp) protein (158aa)
Ribosomal-protein-alanine acetyltransferase Tax=uncultured prokaryote RepID=H5S9I7_9ZZZZ
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:BAL52823.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
ribosomal-protein-alanine acetyltransferase
S_p1_S3_coassembly_k141_809674_15
unknown

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13894..14484
DNA (591bp) protein (197aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_16
unknown

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15036..16379
DNA (1344bp) protein (448aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_17

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comp(16401..17546)
DNA (1146bp) protein (382aa)
hypothetical protein
GTP-binding protein; K06944 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59601.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_809674_18
unknown

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comp(17604..18992)
DNA (1389bp) protein (463aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_19

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19083..19847
DNA (765bp) protein (255aa)
TatD DNase family protein {ECO:0000313|EMBL:KHO54298.1}; EC=3.1.21.- {ECO:0000313|EMBL:KHO54298.1};; species="Archaea.;" source="archaeon GW2011_AR21.;"
PREDICTED: putative deoxyribonuclease TATDN3-like Tax=Anolis carolinensis RepID=UPI0002038602
TatD-related deoxyribonuclease
S_p1_S3_coassembly_k141_809674_20
unknown

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19892..20536
DNA (645bp) protein (215aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_21
uncultured euryarchaeote Alv-FOS4, Euryarchaeota, Archaea

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20537..21118
DNA (582bp) protein (194aa)
Putative uncharacterized protein Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA94_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:AAZ32488.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured euryarchaeote Alv-FOS4.;"
hypothetical protein
S_p1_S3_coassembly_k141_809674_22
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

21337..22806
DNA (1470bp) protein (490aa)
Pyruvate, water dikinase Tax=Yersinia mollaretii ATCC 43969 RepID=C4S9M6_YERMO bin=ACD11 species=Yersinia mollaretii genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
yvkC; phosphotransferase yvkC
Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
S_p1_S3_coassembly_k141_809674_23

Not on your lists

comp(22849..23544)
DNA (696bp) protein (232aa)
ribonuclease HIII (EC:3.1.26.4)
ribonuclease HIII; K03471 ribonuclease HIII [EC:3.1.26.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_809674_24
unknown

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comp(23671..23832)
DNA (162bp) protein (54aa)

This feature has no annotations

S_p1_S3_coassembly_k141_809674_25
AR10, Diapherotrites, DPANN, Archaea

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comp(23838..24770)
DNA (933bp) protein (311aa)
Fic family protein
Fic family protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_809674_26
GWF2_OD1_40_10, Parcubacteria, Bacteria

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24994..25428
DNA (435bp) protein (145aa)
Transposase Tax=mine drainage metagenome RepID=T0ZYP0_9ZZZZ
Transposase {ECO:0000313|EMBL:KKR36714.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
transposase
S_p1_S3_coassembly_k141_809674_27

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25643..28105
DNA (2463bp) protein (821aa)
Uncharacterized protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0UL46_METS4
Marine sediment metagenome DNA, contig: S01H4_L01337 {ECO:0000313|EMBL:GAG53980.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_809674_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(28165..28524)
DNA (360bp) protein (120aa)
Transcriptional modulator of MazE/toxin, MazF Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZQ3_HALMD
MazF family transcriptional regulator
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ACV48821.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 /; NCIMB 13541) (Haloarcula mukohataei).;"
S_p1_S3_coassembly_k141_809674_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28502..28762)
DNA (261bp) protein (87aa)
AbrB family transcriptional regulator Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E7N7_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ42932.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
Displaying items 1-30 of 34 in total

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