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S_p1_S3_coassembly_k141_2181163

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2181163_trna_1
unknown

Not on your lists

45..118
DNA (74bp)
transferRNA Lys
S_p1_S3_coassembly_k141_2181163_1
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(224..979)
DNA (756bp) protein (252aa)
SPFH domain, Band 7 family protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3L3_TURPD
SPFH domain, Band 7 family protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
S_p1_S3_coassembly_k141_2181163_2
unknown

Not on your lists

1452..1898
DNA (447bp) protein (149aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2181163_3
unknown

Not on your lists

comp(1843..2112)
DNA (270bp) protein (90aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2181163_trna_2
unknown

Not on your lists

1948..2021
DNA (74bp)
transferRNA Phe
S_p1_S3_coassembly_k141_2181163_4
Thermococcus cleftensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2251..3837
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus cleftensis.;"
Lysine--tRNA ligase Tax=Thermococcus sp. CL1 RepID=I3ZUZ4_9EURY
lysyl-tRNA synthetase
S_p1_S3_coassembly_k141_2181163_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3842..4579)
DNA (738bp) protein (246aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2181163_6
R_OD1_Uhrbacteria_63_20, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4713..4958
DNA (246bp) protein (82aa)
Glutaredoxin-like protein Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRX3_CLOSH
glutaredoxin-like protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Uhrbacteria_63_20_curated
S_p1_S3_coassembly_k141_2181163_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4968..6005)
DNA (1038bp) protein (346aa)
endoglucanase (EC:3.2.1.4)
cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2181163_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6011..7537)
DNA (1527bp) protein (509aa)
aldH; aldehyde dehydrogenase NAD+ (EC:1.2.1.3)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p1_S3_coassembly_k141_2181163_9
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7534..7887)
DNA (354bp) protein (118aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44) bin=bin5_DeltaP species=Leptospira wolffii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
ahpD; Alkyl hydroperoxide reductase AhpD (EC:1.11.1.15)
Tax=CSP1_8_Deltaproteobacteria
S_p1_S3_coassembly_k141_2181163_10
unknown

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comp(7865..8104)
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2181163_11
R_WWE3_48_15, WWE3, Bacteria

Not on your lists

8155..8775
DNA (621bp) protein (207aa)
hypothetical protein
transmembrane_regions bin=GW2011_AR10_complete species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPHIGHO2_01_FULL_WWE3_48_15_curated
S_p1_S3_coassembly_k141_2181163_12
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(8772..9254)
DNA (483bp) protein (161aa)
transcriptional regulator, MarR family
transcriptional regulator, MarR family bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_2181163_13
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

9325..9786
DNA (462bp) protein (154aa)
hypothetical protein
transmembrane_regions bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_05
S_p1_S3_coassembly_k141_2181163_14
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

9783..9980
DNA (198bp) protein (66aa)
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_2181163_15
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

9993..10904
DNA (912bp) protein (304aa)
heavy metal transport/detoxification protein
heavy metal transport/detoxification protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_06
S_p1_S3_coassembly_k141_2181163_16
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

10889..13075
DNA (2187bp) protein (729aa)
Copper-translocating P-type ATPase Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFH8_METPE
copper-translocating P-type ATPase
Tax=CG_Micra_01
S_p1_S3_coassembly_k141_2181163_17
unknown

Not on your lists

13102..13326
DNA (225bp) protein (75aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2181163_18
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

13333..14883
DNA (1551bp) protein (517aa)
min:Minf_1469 sufI; multicopper oxidase bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
multicopper oxidase type 3
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
S_p1_S3_coassembly_k141_2181163_19
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(14898..15665)
DNA (768bp) protein (256aa)
Putative ABC transporter, permease protein Tax=Hydrogenophaga sp. PBC RepID=I4MTM6_9BURK
ABC transporter protein, membrane protein
Tax=CG_Micra_01
S_p1_S3_coassembly_k141_2181163_20
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(15662..16411)
DNA (750bp) protein (250aa)
Abc3 Tax=Lactobacillus plantarum RepID=Q8GGJ1_LACPN
ssuB; Aliphatic sulfonates import ATP-binding protein ssuB
Tax=CG_Micra_01
S_p1_S3_coassembly_k141_2181163_21
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(16412..17386)
DNA (975bp) protein (325aa)
NMT1/THI5 like domain protein Tax=Herbaspirillum sp. GW103 RepID=I3CSJ1_9BURK
ABC transporter, substrate binding protein
Tax=CG_Micra_01
S_p1_S3_coassembly_k141_2181163_22

Not on your lists

17454..18203
DNA (750bp) protein (250aa)
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47334.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
S_p1_S3_coassembly_k141_2181163_23

Not on your lists

18167..19090
DNA (924bp) protein (308aa)
Conserved hypothetical membrane protein, DUF6 family {ECO:0000313|EMBL:KKS90258.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_43_11.;"
Conserved hypothetical membrane protein, DUF6 family bin=GWD1_TM7_39_7 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
hypothetical protein
S_p1_S3_coassembly_k141_2181163_24
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(19135..20595)
DNA (1461bp) protein (487aa)
Uncharacterized protein Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HJD0_9EURY
ATPase AAA
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_2181163_25

Not on your lists

20797..21195
DNA (399bp) protein (133aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like protein family transcriptional regulator {ECO:0000313|EMBL:AJF59638.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_2181163_26
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

21201..22610
DNA (1410bp) protein (470aa)
FeS assembly protein SufB {ECO:0000313|EMBL:KKQ17612.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
S_p1_S3_coassembly_k141_2181163_27
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

22650..23876
DNA (1227bp) protein (409aa)
FeS assembly protein SufD Tax=uncultured candidate division OP1 bacterium RepID=H5SHY7_9BACT
SufBD protein {ECO:0000313|EMBL:KKQ17613.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
SufBD protein
S_p1_S3_coassembly_k141_2181163_28
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

23873..25123
DNA (1251bp) protein (417aa)
Cysteine desulfurase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Z3_SPHTD bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
SufS family cysteine desulfurase
Tax=CG_Anaero_02
Displaying items 1-30 of 57 in total

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